Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g1011 ATGGCAATGGAGGAACCTAGCCAAGTGAAGCGTGCCCTAATTGATTCATCGGCTGGTGCTATTTCCGGTGGAATTTCACGTACTGTCACTTCTCCACTTGATGTTATCAAGATTAGATTCCAGGTTCAGCTAGAGCCCACATCAACATGGGCTTTACTACGCAGGGATTTGGTTACGCCGTCCAAATATACTGGAATGTTTCAGGCAAGCAGAGATATTTTGAGAGAAGAAGGCGTGCGGGGCTTTTGGCGGGGAAATGTACCGGCATTGCTCATGGTTATGCCATATACAGCTATACAATTTACAGTTTTGCATAAGATTAAGACTCTTGCCTCTGGCTCTTCCAATACAGAGGATCATGTTGGTCTGAGCCCTTATCTATCTTATGTCAGTGGGGCATTAGCTGGGTGTGCAGCTACTTTGGGGTCATATCCCTTTGATCTTATCCGGACTATATTAGCTTCTCAGGGTGAGCCAAAGGTATATCCAAATATGAGGTCAGCATTAATTGATATCATCCAGACTCGTGGATTCCAAGGATTGTATGCTGGATTGTCACCAACTCTAGTTGAGATTGTACCTTATGCAGGCTTACAATTTGGTACCTACGATACATTTAAGCGTTGGGCCATGGCTTGGAACCATTTCAGATATTCCAACACCACTGCGGATGATAGCCTTTCTAGCTTTCAGCTTTTTATCTGTGGGTTGGCGGCTGGGACATGTGCCAAACTTGTTTGTCATCCACTTGATGTGGTCAAGAAAAGATTCCAGATTGAAGGGCTTCAAAGGCATCCAAGATATGGAGCTCGGGTTGAGCATCGTGCATACAGGAATATGTTTGATGCCATGCAACGCATATTGCAGTTTGAGGGTTGGGCTGGTCTATACAAGGGGATACTCCCATCAACTGTTAAAGCTGCACCAGCTGGTGCTGTAACATTTGTTGCATATGAATTGACATCAGATTGGTTAGAGACCCTTTCTTGA 990 0.4475 MAMEEPSQVKRALIDSSAGAISGGISRTVTSPLDVIKIRFQVQLEPTSTWALLRRDLVTPSKYTGMFQASRDILREEGVRGFWRGNVPALLMVMPYTAIQFTVLHKIKTLASGSSNTEDHVGLSPYLSYVSGALAGCAATLGSYPFDLIRTILASQGEPKVYPNMRSALIDIIQTRGFQGLYAGLSPTLVEIVPYAGLQFGTYDTFKRWAMAWNHFRYSNTTADDSLSSFQLFICGLAAGTCAKLVCHPLDVVKKRFQIEGLQRHPRYGARVEHRAYRNMFDAMQRILQFEGWAGLYKGILPSTVKAAPAGAVTFVAYELTSDWLETLS* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g1011 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 227 324 IPR018108 -
Lan1g1011 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 110 IPR018108 -
Lan1g1011 329 Pfam Mitochondrial carrier protein 227 325 IPR018108 -
Lan1g1011 329 Pfam Mitochondrial carrier protein 125 210 IPR018108 -
Lan1g1011 329 Pfam Mitochondrial carrier protein 15 111 IPR018108 -
Lan1g1011 329 SUPERFAMILY Mitochondrial carrier 10 319 IPR023395 -
Lan1g1011 329 ProSiteProfiles Solute carrier (Solcar) repeat profile. 123 209 IPR018108 -
Lan1g1011 329 PRINTS Mitochondrial carrier protein signature 15 28 IPR002067 GO:0055085
Lan1g1011 329 PRINTS Mitochondrial carrier protein signature 28 42 IPR002067 GO:0055085
Lan1g1011 329 PRINTS Mitochondrial carrier protein signature 85 105 IPR002067 GO:0055085
Lan1g1011 329 PRINTS Mitochondrial carrier protein signature 138 156 IPR002067 GO:0055085
Lan1g1011 329 PRINTS Mitochondrial carrier protein signature 182 200 IPR002067 GO:0055085
Lan1g1011 329 PRINTS Mitochondrial carrier protein signature 236 258 IPR002067 GO:0055085
Lan1g1011 329 Gene3D Mitochondrial carrier domain 7 327 IPR023395 -
Lan1g1011 329 PANTHER MITOCHONDRIAL CARRIER PROTEIN-RELATED 5 327 - -
Lan1g1011 329 PANTHER SOLUTE CARRIER FAMILY 25 5 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g1011 Lan-Chr1 20510307 20514758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g1011 3 326 Organic Solute Cotransporters AT3G21390 73.252 0.0 509
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g1011 K15108 - gmx:100784986 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1011 1 20510307 20514758 Lan16g1177 16 19179543 19186351 PCT
Lan16g1177 16 19179543 19186351 Lan1g1011 1 20510307 20514758 PCT