Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan1g0953 | ATGGGGATTTGTACGGCTAAGCCTCTAGCTAGAGATAATGATTCTGATCATGATGTGGAGCTTGTTTCTGGGAACGTGCAACTTATTACCACAAAAGAATCTTGGGACCAAAAGTTAGAAGAAGCAAGGCATGATGGCAAAATTGTGATTGCAAATTTCAGTGCAACATGGTGTGATCCTTGTAAAATGATCGCACCATGTTACTGCGAGTTATCAAAGAAACATCCATCCATTTTGTTCTTATTAGTTGATGTGGATGAACTGGCTGATTTTAGCAGTTCATGGGACATCAAAGCCACACCAACCTTCTTCTTTCTTAGAGATGGAAAAGAGTTTGACAAACTTGTAGGAGCCAACAAGCCAGAGTTGGAAAAGAAGATTGCTGCACTTACTAAATCACTTCCCTAG | 408 | 0.402 | MGICTAKPLARDNDSDHDVELVSGNVQLITTKESWDQKLEEARHDGKIVIANFSATWCDPCKMIAPCYCELSKKHPSILFLLVDVDELADFSSSWDIKATPTFFFLRDGKEFDKLVGANKPELEKKIAALTKSLP* | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan1g0953 | 135 | Pfam | Thioredoxin | 29 | 128 | IPR013766 | - | |
| Lan1g0953 | 135 | ProSiteProfiles | Thioredoxin domain profile. | 8 | 132 | IPR013766 | - | |
| Lan1g0953 | 135 | CDD | TRX_family | 33 | 128 | - | - | |
| Lan1g0953 | 135 | Gene3D | Glutaredoxin | 1 | 134 | - | - | |
| Lan1g0953 | 135 | PANTHER | THIOREDOXIN | 7 | 133 | - | - | |
| Lan1g0953 | 135 | PANTHER | THIOREDOXIN H9 | 7 | 133 | - | - | |
| Lan1g0953 | 135 | SUPERFAMILY | Thioredoxin-like | 21 | 132 | IPR036249 | - | |
| Lan1g0953 | 135 | PRINTS | Thioredoxin family signature | 49 | 57 | - | - | |
| Lan1g0953 | 135 | PRINTS | Thioredoxin family signature | 57 | 66 | - | - | |
| Lan1g0953 | 135 | PRINTS | Thioredoxin family signature | 96 | 107 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan1g0953 | Lan-Chr1 | 20150465 | 20152184 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan1g0953 | K03671 | - | gmx:100813401 | 218.394 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan12g0139 | 12 | 1591502 | 1596195 | Lan1g0953 | 1 | 20150465 | 20152184 | LSH |