Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0938 ATGGCTAAAGCATTGGCACTATGTTTGATGGTTATGTTGATTATTGCTTCTCCCACTGTATTTGGAGTTGACCATACTGTTGGTGATAGTGCTGGATGGAGTCTAGGGAATGATTTCACCACCTGGGCCTCTGGGAAAACCTTCAAACTTGGTGATAATTTGGTGTTCATATATGATTCCACCCACCAAGTGAATGAAGTTGATGAAAGTGGCTACAAAGCGTGCAGTGCAAGCAACTCCATCAAAAACTATCATGATGGAAACTCCAAAGTTCCATTGACTACATCAGGCAATGTTTACTTTATATGCCCCATACCAGGTCACTGTGCTGGAGGCATGAAGCTTCAACTCAATGTTGTTGCTTCTGACACCACCACCACCCCAAGTGGTGGTTCTCCACCAACCACCCCAAGTGGTGGCTCTACACCAACCACCCCGAGTGGTGGCTCTACACCAACAACCCCATCAAACCCATCTCCTTATACCCCATCTGGGTCAGGCACTCCTCCAGCAACAACATCACCAAAGCCAAGTGGAGCAGTCACTGTTTCAAGTGGGATCAGCCATTTCATGTTTGTAGCAGCTATTGTTTTGGGTTTCATCATGGGTTAG 612 0.4641 MAKALALCLMVMLIIASPTVFGVDHTVGDSAGWSLGNDFTTWASGKTFKLGDNLVFIYDSTHQVNEVDESGYKACSASNSIKNYHDGNSKVPLTTSGNVYFICPIPGHCAGGMKLQLNVVASDTTTTPSGGSPPTTPSGGSTPTTPSGGSTPTTPSNPSPYTPSGSGTPPATTSPKPSGAVTVSSGISHFMFVAAIVLGFIMG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0938 203 Gene3D - 22 125 IPR008972 -
Lan1g0938 203 PANTHER BLUE COPPER PROTEIN 7 141 IPR039391 GO:0009055
Lan1g0938 203 MobiDBLite consensus disorder prediction 123 180 - -
Lan1g0938 203 CDD Phytocyanin 23 119 - -
Lan1g0938 203 Pfam Plastocyanin-like domain 34 113 IPR003245 GO:0009055
Lan1g0938 203 ProSitePatterns Type-1 copper (blue) proteins signature. 97 113 IPR028871 -
Lan1g0938 203 MobiDBLite consensus disorder prediction 166 180 - -
Lan1g0938 203 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN-RELATED 7 141 - -
Lan1g0938 203 MobiDBLite consensus disorder prediction 123 155 - -
Lan1g0938 203 ProSiteProfiles Phytocyanin domain profile. 23 121 IPR003245 GO:0009055
Lan1g0938 203 SUPERFAMILY Cupredoxins 22 120 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0938 Lan-Chr1 20063182 20064025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0938 9 160 Miscellaneous Gene Families AT2G32300 40.127 1.22e-33 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0938 - - lang:109342480 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0100 12 1105890 1108170 Lan1g0938 1 20063182 20064025 LSH