Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0100 ATGGCTAGAACATTGGTAGTTTCTTTGTTGGTTATGTTTTTGGCTTCTGAAACTGTGTTTGGAGTTGACCATATTGTTGGTGGTAGTGGTGGATGGGCTCTAGGCAATGATTACAGTACATGGGCTTCTGGAGAAACCTTCACAGTTGGTGATAATTTGGTATTCAATTATGATTCAACCCACCAAGTGGATCAAGTTGATGCAAGTAGCTACAAAAGTTGCAGTGCAAGCAATTCCATAAAAAACTACAATGATGGAAACTCCAAAGTTCCATTGACTACATCAGGCACACTTTACTTCATATGCCCTACAACAGGACACTGTGCTGGTGGCATGAAACTTCAACTCAATGTTGTTGCAGCTACTTCCACCACCACCCCAAGTGGTGGTTCTCCACCAACAACACCAAGTAGTGGCACCACTCCAACCCCATCAACACCATCTGAGTCAGGTACTCCTCCACCAGCAACACCATCAACAAAGGCAAATGGTGCAGTTAGGGTTTCTAGTGGGGTTAGTCATTTGATTGGGTCTTTGTTTGTAGCAGCTATTGTTTTTAGTTTCATGGGCTAG 573 0.4346 MARTLVVSLLVMFLASETVFGVDHIVGGSGGWALGNDYSTWASGETFTVGDNLVFNYDSTHQVDQVDASSYKSCSASNSIKNYNDGNSKVPLTTSGTLYFICPTTGHCAGGMKLQLNVVAATSTTTPSGGSPPTTPSSGTTPTPSTPSESGTPPPATPSTKANGAVRVSSGVSHLIGSLFVAAIVFSFMG* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0100 190 CDD Phytocyanin 22 118 - -
Lan12g0100 190 ProSiteProfiles Phytocyanin domain profile. 22 120 IPR003245 GO:0009055
Lan12g0100 190 PANTHER BLUE COPPER PROTEIN 6 140 IPR039391 GO:0009055
Lan12g0100 190 MobiDBLite consensus disorder prediction 123 146 - -
Lan12g0100 190 MobiDBLite consensus disorder prediction 123 163 - -
Lan12g0100 190 SUPERFAMILY Cupredoxins 21 119 IPR008972 -
Lan12g0100 190 PANTHER CUPREDOXIN SUPERFAMILY PROTEIN-RELATED 6 140 - -
Lan12g0100 190 Pfam Plastocyanin-like domain 35 112 IPR003245 GO:0009055
Lan12g0100 190 Gene3D - 22 130 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0100 Lan-Chr12 1105890 1108170 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0100 5 146 Miscellaneous Gene Families AT2G32300 45.455 3.78e-34 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0100 - - lang:109342480 211.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0100 12 1105890 1108170 Lan1g0938 1 20063182 20064025 LSH