Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0881 ATGGCAAAACGTTCGCATGTGCCGAAATTTGGCAATTGGGAAGGCGAAGATGTTCCTTATACAGCTTATTTTGATAAGGCCCGGCAAGGTAGAACTGGAACAAAGATGATAAATCCGAATGACCCCGAGGAAAATCCAGATTTAACTATTGATTCAGAGGATCTACCCGCGAAAGGATCAGTGAGGTCTGCAAACGAGTTACATAAGATCAAGGAAGACGGTGATCCGAAGAATTTTACTGATTCTCCAGCTCGTCATTACAATGCAGGCAATAGGAGTAGCGGTAATGGAAGCCACGGAGTAGGTTCTGCTGATAACCAAAGAAGACCTTTGAGACAAAGTATTGGTTCTGAATACAGCGTTGAACGCTCTCCCCTGCATCGGCAGACTAAAACCTCAGGCAAAGATAGTCCCTCATTGGAAGTAAAGAATTCATATGACAGCAGCCATGGTGCACCAGGAAGATCTCGGTTAAAATCGGTTAATCGAGGGGATGAAACTCCTGATAAAGGTGCAGCTGTTCCGAAGTTCGGCGAATGGGATATGAATAACCCTGCATCAGCTGATGGATTTACACACATTTTCAACCAAGTGAGAGAGGAGAGACAAGGTGGAGCTGGAAATATTCCGGGCACATATAATGGGAGACCACATGCTATCCGGAAACATCCGACCCATGATAAAACTCAGTGTTCTTGCTTTGCATGGGGCAAAAAATGA 720 0.4486 MAKRSHVPKFGNWEGEDVPYTAYFDKARQGRTGTKMINPNDPEENPDLTIDSEDLPAKGSVRSANELHKIKEDGDPKNFTDSPARHYNAGNRSSGNGSHGVGSADNQRRPLRQSIGSEYSVERSPLHRQTKTSGKDSPSLEVKNSYDSSHGAPGRSRLKSVNRGDETPDKGAAVPKFGEWDMNNPASADGFTHIFNQVREERQGGAGNIPGTYNGRPHAIRKHPTHDKTQCSCFAWGKK* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0881 239 MobiDBLite consensus disorder prediction 64 80 - -
Lan1g0881 239 MobiDBLite consensus disorder prediction 131 151 - -
Lan1g0881 239 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 168 203 IPR008700 -
Lan1g0881 239 MobiDBLite consensus disorder prediction 202 227 - -
Lan1g0881 239 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 1 236 - -
Lan1g0881 239 MobiDBLite consensus disorder prediction 84 120 - -
Lan1g0881 239 MobiDBLite consensus disorder prediction 29 185 - -
Lan1g0881 239 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 1 236 IPR040387 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0881 Lan-Chr1 19616935 19620786 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0881 K13456 - gmx:100808509 331.257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1802 11 34688914 34691715 Lan1g0881 1 19616935 19620786 PCT
Lan1g0881 1 19616935 19620786 Lan11g1802 11 34688914 34691715 PCT