Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1802 ATGGCAACACAGCAACGTTCTCATGTTCCAAAATTTGGCAATTGGGAGAGTGAAGACAATGATCCTGAGGAAAGTTTAGATTCAGCTATTGATAACTCATCTTCGGCTCGAGTTGATTCAGAGGATCCATCTGCAAAGGGATCGGTAAAATCAACTGATGAGTTACAAAAGAGCAGGGAGGATTCTGATCCTAAGCATTTTACTGATTCTCCAGCTCGTCAAAACAATGTAGGCAATAGGGGTGCCGGCCAGGGAGTAGGTTCTGCTGATACCCGTAGACGACCTTCGAGACAAAGTACTGGCTCTGAGTACAGTGTTGAACGTTCACCCCTTCATCGTCAGGCTAGAGCTCCAGCGAAAGATAGTCCCTCTAGGGAAGGAAAGAGTTCATATGACAGCAGCCATGGTACACCAGGAAGGTCCCGATTAAGACCAGTTCATCGAGGAGATGAAAGTCCTGATAGAGGTGCTGCTGTTCCAAAGTTCGGGGACTGGAATGAGAATAACCCTGCAGCAGCTGATGGCTATACTCACATCTTCAACAAAGTGCGGGAGGAGAGACAAGTTGCCGCCGGAAATGCACCAGGGACGCCGAACGGGAGATCATATGCTGTCAAGAACCAGGCAGCCAATGACAAAGGCCAGAGTTGCTGCTTTTGGTGGGGCAGAAAATGA 675 0.4844 MATQQRSHVPKFGNWESEDNDPEESLDSAIDNSSSARVDSEDPSAKGSVKSTDELQKSREDSDPKHFTDSPARQNNVGNRGAGQGVGSADTRRRPSRQSTGSEYSVERSPLHRQARAPAKDSPSREGKSSYDSSHGTPGRSRLRPVHRGDESPDRGAAVPKFGDWNENNPAAADGYTHIFNKVREERQVAAGNAPGTPNGRSYAVKNQAANDKGQSCCFWWGRK* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1802 224 MobiDBLite consensus disorder prediction 109 128 - -
Lan11g1802 224 Pfam Cleavage site for pathogenic type III effector avirulence factor Avr 153 188 IPR008700 -
Lan11g1802 224 MobiDBLite consensus disorder prediction 143 157 - -
Lan11g1802 224 MobiDBLite consensus disorder prediction 43 68 - -
Lan11g1802 224 MobiDBLite consensus disorder prediction 27 41 - -
Lan11g1802 224 PANTHER RIN4, PATHOGENIC TYPE III EFFECTOR AVIRULENCE FACTOR AVR CLEAVAGE-RELATED 19 220 - -
Lan11g1802 224 MobiDBLite consensus disorder prediction 1 170 - -
Lan11g1802 224 PANTHER RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN 19 220 IPR040387 -
Lan11g1802 224 MobiDBLite consensus disorder prediction 91 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1802 Lan-Chr11 34688914 34691715 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1802 K13456 - gmx:100499220 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g1802 11 34688914 34691715 Lan1g0881 1 19616935 19620786 PCT
Lan1g0881 1 19616935 19620786 Lan11g1802 11 34688914 34691715 PCT