Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0870 ATGGGAACAAAGAAGGGTAATTCCTTAGTGAATGTTTTGATTGGATGGTTGAGCAAGAAATCTTTGAAAGTGAAGATATTTTTGGGGATCTTGTTTGCTCTTTTTGCTTTGGTGATTCTAGACATTATTGTCAAAGATAAGAGTTATTTCTTTGTTGCATCTGAAGCAGTATATATTGCTGGGACTATTGTCCTTTTATACAAGCTCTTCAGGCACAAAACATGTTCTGGTGTATCACTCAAGACACAAGAACTCATGGCTTTATTCCTAGCAGCAAGGTTAACTTGTAGCATCTCCATTGAAGCTAACCTTCACACTTGGCTAGATTTCACATCTCTAGTCTCGGTATTATTGGTTATATGGATGATAAGATTCAAGTTGAAATCCTCATATATAAAGGAGTTGGATAATCTTAGACTCTCCTTTGTGGTGGTGCCTTGTGCAATCATTGCAATTCTAATACACCCTACTACAATTCAAAGTCACTTCTCTCGAGCACTTTGGGCATTCTCTGTGTATTTGGAAGCAATTTCAGTTCTCCCTCAACTTCGTTATATGCAAAATGCAAAGATGATTGAAACATTCACAGGAAAATATGTATTTGCTCTTGGTGTTTCAAAATTCCTTGGATTGGCTCATTGGCTCATTCAGATTTATAAGACTCGAGGGGCATACTTTTATCTTATTGGGAGTGGCTTTTTTTGGTTCACAGTAGGTTTTGTAGCAGAGATTGTTCAATCTTTTATCTTAGCTGATTTCTGCTACTATTACATAAAGAGTTATATGCAAGGACAACTTTTGAGGAAGATGCCTGTTTAA 819 0.3651 MGTKKGNSLVNVLIGWLSKKSLKVKIFLGILFALFALVILDIIVKDKSYFFVASEAVYIAGTIVLLYKLFRHKTCSGVSLKTQELMALFLAARLTCSISIEANLHTWLDFTSLVSVLLVIWMIRFKLKSSYIKELDNLRLSFVVVPCAIIAILIHPTTIQSHFSRALWAFSVYLEAISVLPQLRYMQNAKMIETFTGKYVFALGVSKFLGLAHWLIQIYKTRGAYFYLIGSGFFWFTVGFVAEIVQSFILADFCYYYIKSYMQGQLLRKMPV* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0870 272 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 5 271 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan1g0870 272 Pfam ER lumen protein retaining receptor 74 216 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan1g0870 272 PRINTS ER lumen protein retaining receptor signature 50 69 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan1g0870 272 PRINTS ER lumen protein retaining receptor signature 77 97 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan1g0870 272 PRINTS ER lumen protein retaining receptor signature 168 188 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan1g0870 272 PRINTS ER lumen protein retaining receptor signature 190 204 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan1g0870 272 PRINTS ER lumen protein retaining receptor signature 204 222 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan1g0870 272 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 5 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0870 Lan-Chr1 19516838 19529581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0870 1 272 Miscellaneous Gene Families AT3G25160 58.824 6.34e-120 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0870 - K10949 gmx:100790733 368.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0027 12 223156 227386 Lan1g0870 1 19516838 19529581 LSH