Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0027 ATGAGAACAAAGAAGGGTCTTTCACCAATGAATGTTTTGATTGGATGGTTGAGCAAAAACTCTAAGAAAGTGAACATATTATTACTCATTTTACTTGCACTTATTACTTTGGTGGCTCTAAAGTTTATTATCAAAGATACAGATTATTGCTACTATGCTTCTCAAGCAATCTATATTGTTGGGACTCTTATCCTCTTCTACAAGCTTTTCACTCACAAGAACTGTTCTGGTGTATCACTAAAGACACAAGAGCTCATGGCTTTATTCCTAGTAGCAAGGTTATGTTGTAGTATGGTCCTCACCGAGGCTAATATCCACACTACAATAGATTTGACATCTCTATTGTCAGTATTATTAGTCATATGGATGATTAGATTCAAGTTAAAGTCATCTTATATAAAGGAATTGGACACAATTAAACTTCACTATGTGATTGTGGCTTGTGCAGTCCTTGCAATTGTAGTACACCCTCATACAGGACATTTTCGAATTTATGGAACTTTTTGGTCATTTTCTGTGTATTTGGAAGCAATATCTGTTCTCCCTCAACTTCGATATATGCAGAATGCAAAGTTGATTGAACCAATGACAGGAAAATATGTATTTGCTCTTGGTCTTTCAAAATTCTTGGGATTGGCAAATTGGATTATTCAGATTTATGAGACTCGAGGGGAATACTTTTTCTTAGATGGGGGTGGCTATTTCTGGTACTTGATAGGTTTTATTGCAGAGATGGTTCAATCATTCATCTTAGCAGACTTTTGTTACTATTACATTAAGAGTTTCATGCAAGGACGGCTTTTGAAGAAGATGCCTGTTTAA 822 0.3528 MRTKKGLSPMNVLIGWLSKNSKKVNILLLILLALITLVALKFIIKDTDYCYYASQAIYIVGTLILFYKLFTHKNCSGVSLKTQELMALFLVARLCCSMVLTEANIHTTIDLTSLLSVLLVIWMIRFKLKSSYIKELDTIKLHYVIVACAVLAIVVHPHTGHFRIYGTFWSFSVYLEAISVLPQLRYMQNAKLIEPMTGKYVFALGLSKFLGLANWIIQIYETRGEYFFLDGGGYFWYLIGFIAEMVQSFILADFCYYYIKSFMQGRLLKKMPV* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0027 273 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 7 272 - -
Lan12g0027 273 Pfam ER lumen protein retaining receptor 74 218 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan12g0027 273 PRINTS ER lumen protein retaining receptor signature 50 69 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan12g0027 273 PRINTS ER lumen protein retaining receptor signature 77 97 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan12g0027 273 PRINTS ER lumen protein retaining receptor signature 169 189 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan12g0027 273 PRINTS ER lumen protein retaining receptor signature 191 205 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan12g0027 273 PRINTS ER lumen protein retaining receptor signature 205 223 IPR000133 GO:0006621|GO:0016021|GO:0046923
Lan12g0027 273 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 7 272 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0027 Lan-Chr12 223156 227386 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0027 1 273 Miscellaneous Gene Families AT3G25160 52.747 3.70e-104 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0027 - K10949 gmx:100790733 322.013
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0027 12 223156 227386 Lan1g0870 1 19516838 19529581 LSH