Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0439 ATGAATGCTGCGTTCGTCTTCACGTTTCTCTCTATTCGTATTTTCCTTTCTTTTCACTCACAATTCCTATTTTCCTTTTCGTATATCTCAGACATTGTTCCTGATTTCGGCGTCTCATTTCTTCCAGATTTAGCAAATTTAAGTTTTTTTATTCGAAACAGGATGAAGGCAGGCTTTAGTAGATTAAAGGGTAAAGAAATTTCTCTTATTTCTATTGTTCTCATGGCTGCAACCATCATTTTATGGTCATGGGAGAAAACACCCGGCCTCACTGCCTTTCCTCCTCCTCAAAAACCACTGCAGCTGTCTTCAGATCATTTAAAGAGCATGGCTGAAAGTAATACTAGAACTACTTCAAAGAAAGAAGTAAAAGAACATATTCTTTCAAGTGTGTCAGATGAAGAACCAAAACATGAAAGAGTCTTGGAAGCTGGGAAAAGCCATGGTATACAAACTTTATCCACTCCAACATCTGAGGCTAAAAGGAATGATGCTGAGGTGGAGAAAACTTCAAAACTAGAAGAACATAAAGAAGATATTTTCATGAACTCTCAACAAAGAAGCTCTTCAATTGGCAACAATTGGAATAATGCTACAGAAACTAAAGCGTGTAATTATGCAAAAGGAAAATGGGTTCCAGATGACAACCGGCCTTTGTATTCAGGATTTGGTTGCAAACAGTGGCTTTCATCAATGTGGGCTTGCCGCATGATGCAGCGTACTGATTTTGCTTATGAGAAGCTTCGGTGGCAGCCAAAAGATTGTAAAATGGAGGAATTTGAAAGTTCTAAATTTTTGAAAAGGTTGCAAAACAAAACTCTAGCTTTTGTTGGAGACTCGTTGGGTCGGCAACAGTTCCAGTCTTTAATGTGCATGGCCACTGGTGGTGAGGAGAAGCCTGAAGTGGAAGATGTGGGGAGCGAGTATGGATTGGCTTTAGCTGAGGGCAATGCACGTCCTAATGGGTGGGCTTACCGTTTCCCAAGCACCAATACTACCATTCTGTACTACTGGTCTGCAATCCTCTGTGATGTTGAACCTATTGATGTCAACAATCCACAAACGGAATATGCAATGCACCTTGATCGGCCAGCAGCGTTCTTGCGTGAATATCTCCACAAGTTCGATGTGCTCGTTCTCAACACAGGTCACCACTGGAATCGAGGAAAGCTTAATGCTAATAGATGGGTAATGCATGTTGGTGGTGTACCAAATACTGATAAGAAGATAGCAGTGATTTGGGGTGCCAAGAATCTTACAATTCACAGCGTTGTTAGTTGGGTGAATTCACAGCTTCCAAAATATCCAGGTTTGAAGGCATTCTTTCGGTCCATCTCTCCTAGGCATTTTTTTGGCGGGGACTGGAACACAGGAGGCAGTTGTGATAACACTAAACCAATGTCGGTAGGGAAGGAAATATTGGATGAGGAGTCCAGTGATCCAGTTGCTGCAAATGCTGTGAAGGGAACAGGGATAAAGCTCTTGGACATAACAGGTCTTTCTCAGCTTAGGGATGAGGGTCATATATCACGGTTTAGCCTTACTGCACAGCCTGGTGTGCAGGATTGCTTGCATTGGTGTTTGCCTGGTGTTCCTGATACATGGAATGAAATACTCTTTGCACAAATCTAG 1632 0.4203 MNAAFVFTFLSIRIFLSFHSQFLFSFSYISDIVPDFGVSFLPDLANLSFFIRNRMKAGFSRLKGKEISLISIVLMAATIILWSWEKTPGLTAFPPPQKPLQLSSDHLKSMAESNTRTTSKKEVKEHILSSVSDEEPKHERVLEAGKSHGIQTLSTPTSEAKRNDAEVEKTSKLEEHKEDIFMNSQQRSSSIGNNWNNATETKACNYAKGKWVPDDNRPLYSGFGCKQWLSSMWACRMMQRTDFAYEKLRWQPKDCKMEEFESSKFLKRLQNKTLAFVGDSLGRQQFQSLMCMATGGEEKPEVEDVGSEYGLALAEGNARPNGWAYRFPSTNTTILYYWSAILCDVEPIDVNNPQTEYAMHLDRPAAFLREYLHKFDVLVLNTGHHWNRGKLNANRWVMHVGGVPNTDKKIAVIWGAKNLTIHSVVSWVNSQLPKYPGLKAFFRSISPRHFFGGDWNTGGSCDNTKPMSVGKEILDEESSDPVAANAVKGTGIKLLDITGLSQLRDEGHISRFSLTAQPGVQDCLHWCLPGVPDTWNEILFAQI* 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0439 543 MobiDBLite consensus disorder prediction 115 145 - -
Lan1g0439 543 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 259 541 IPR026057 GO:0016740
Lan1g0439 543 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 58 543 - -
Lan1g0439 543 MobiDBLite consensus disorder prediction 108 171 - -
Lan1g0439 543 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 58 543 - -
Lan1g0439 543 Pfam PMR5 N terminal Domain 203 256 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0439 Lan-Chr1 3541595 3547769 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0439 - - gmx:100788136 743.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0439 1 3541595 3547769 Lan1g0439 1 3541595 3547769 ECH
Lan12g0964 12 16470927 16475715 Lan1g0439 1 3541595 3547769 LSH
Lan1g0439 1 3541595 3547769 Lan15g0182 15 1962510 1966154 PCT
Lan1g0439 1 3541595 3547769 Lan14g0108 14 1405513 1410976 PCT
Lan15g0182 15 1962510 1966154 Lan1g0439 1 3541595 3547769 PCT
Lan14g0108 14 1405513 1410976 Lan1g0439 1 3541595 3547769 PCT