Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0182 ATGAAGGCGGAGACGTATGGATTAAGGGGTAAAGGAGTTTCCCTTATTTCCATTGTTCTAATTTGCACAACTATCATTATATGGTCATGGGAGAAGACGCCTAGTCTAAATGTATCGATTCCCTCTCGAGCAACAATGCAGTTACCTTCAGAAAATATCTCAATTGTGTCACATAAAGAAGCAAAAACTGAGGCTAAAAGGAATGAAAAGGATAAAACTTCAAAACGAGAACATAGGCCAGATTTCGTCAATGACTCTCCACAACGGAGCTCTTTAATTAGTGAAAAAGAAGACAACAATTGGAACAACGCTACAGATAATAAAGTATGTAACTATGCGAAAGGAAAATGGGTTCCGGACAACCACCGCTCTTTTTATTCCGGATTTGGTTGCAAGAGATGGCTCTCAAAAATGTGGGCTTGCCGCTTGACTCAACGCACTGATTTTGCGTATGAGAAGCTTCGATGGCAGCCTAAAGATTGTCAAATGGAGGAATTTGAAAAATCTAAATTTTTAAGAAGGATGCAGCACAAAACTCTAGCACTTATAGGAGACTCATTGAGCCGGCAGCAGTTTCAGTCTTTAATGTGCATGCTCACTAGCGGTAAGAAAACACATGATGTGGAAGATGTAGGGAAAAAGTATGGATTGGCTCGAGGTAAGGGCGCTCTCCGTCCTAATGGGTGGGCTTACCATTTCTTAAGCACCAATACTACCATTCTGTTCTACTGGTCAGCAACACTCTGTGATGTCGAACCTATTGATGCGAGTAATCCAGGATCGGATCAAGCAATGCACCTTGACCGGCCACCAGTGTTCTTGCGCCAATATCTTCACAAGTTTGATGTGCTGGTTCTTAACACAGGTCACCACTGGAATCGGGTAAAGTTCAAGGCTAATAGGTGGGTAATGCGTGTGGGAGGCATGCCAAATACCGATAAGAAGTTAGGAACAATGGGATCTGCTAAGAATCTGACTATTCACAGTATCGTTAGTTGGGTGAACTCACAGCTTCCTAAACATCCAGGTCTGAAGGTATTCTTTCGAAGCATCTCGCCGAGGCATTTTGTTGGAGGAGAGTGGAACACAGGAGGCAGTTGTGACAACACTACGCCAATGTCGGTAGGAAAGGAAATACTATGGGAGGAGTCTACTGACCAAGTTGCTGCACATGCAGTGAAAGGAACAGGAATCAAGCTCTTGGACATAACAGCTCTTTCACATCTTAGGGACGAGGGTCATATATCGCGTTTCAGCATTTCGGCCAAGCCCGGTGTGCATGATTGCTTACATTGGTGTTTGCCTGGTATTCCTGATACATGGAATGAAATATTGTTTGCACAAATCTAG 1350 0.4341 MKAETYGLRGKGVSLISIVLICTTIIIWSWEKTPSLNVSIPSRATMQLPSENISIVSHKEAKTEAKRNEKDKTSKREHRPDFVNDSPQRSSLISEKEDNNWNNATDNKVCNYAKGKWVPDNHRSFYSGFGCKRWLSKMWACRLTQRTDFAYEKLRWQPKDCQMEEFEKSKFLRRMQHKTLALIGDSLSRQQFQSLMCMLTSGKKTHDVEDVGKKYGLARGKGALRPNGWAYHFLSTNTTILFYWSATLCDVEPIDASNPGSDQAMHLDRPPVFLRQYLHKFDVLVLNTGHHWNRVKFKANRWVMRVGGMPNTDKKLGTMGSAKNLTIHSIVSWVNSQLPKHPGLKVFFRSISPRHFVGGEWNTGGSCDNTTPMSVGKEILWEESTDQVAAHAVKGTGIKLLDITALSHLRDEGHISRFSISAKPGVHDCLHWCLPGIPDTWNEILFAQI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0182 449 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 59 449 - -
Lan15g0182 449 PANTHER N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE 4 76 - -
Lan15g0182 449 MobiDBLite consensus disorder prediction 85 99 - -
Lan15g0182 449 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 165 447 IPR026057 GO:0016740
Lan15g0182 449 Pfam PMR5 N terminal Domain 109 162 IPR025846 -
Lan15g0182 449 MobiDBLite consensus disorder prediction 57 99 - -
Lan15g0182 449 MobiDBLite consensus disorder prediction 57 84 - -
Lan15g0182 449 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 59 449 - -
Lan15g0182 449 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 14 4 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0182 Lan-Chr15 1962510 1966154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0182 - - gmx:100788136 641.343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0182 15 1962510 1966154 Lan14g0108 14 1405513 1410976 LSH
Lan12g0964 12 16470927 16475715 Lan15g0182 15 1962510 1966154 PCT
Lan1g0439 1 3541595 3547769 Lan15g0182 15 1962510 1966154 PCT
Lan15g0182 15 1962510 1966154 Lan12g0964 12 16470927 16475715 PCT
Lan15g0182 15 1962510 1966154 Lan1g0439 1 3541595 3547769 PCT