Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lan1g0428 | ATGACGGAAATTGCGAAGGAGGAAGGTTCAGGTAGTCCTAGTTGGGGTGCTTTATTATTCAAGCAAACAACTGGGGATGTGGCTAGAGCGGTTGCTGCTGCTGTTAATTCTCCAAGTTCACCTGTAGTCTATTCATCCAAAGATGATAATGGTGGTAGCCAATTTCAAAGGCTGCAGCATCAAGTTACGAATATGATAAAAGGCTTTTCACACCCTCCAGATGTTAATACAAATTACAATCCCGAAATCCTGACTAGTTTAAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGCACATGGACCATAACTCTTGGAAGGAGCCCTCACGACTGTTTGAGAGCATGGTGGTTGTTGGTCTTCATCCTAATTGTGATGTTCAGGCATTGGGAAGGCAATATGCTGATAGAAAGTTTGAAGGCTCTGGCAAATTTAGAAGTGCACTTGGTTATCAGAACCAATCCCGTATAGAACCCAATATCAATATTGAACCACAGGTCTTATTTGTTTACCCTCCAGAAAAACGGCTGCCACTTAAATGCAAGGATCTTCTTTCTTTCTGCTTCCCGGGAGGCTTGGAGGTTCGTGCTGTTGAGAGAACCCCTTCCTTGAGCGAGTTGAATGAAATTCTTTTTGGGCAGGAACAACTTAAACAAAGAGATCTGTCATTTGTATTCAGGTTACAGGGTGCTGACAATTCAGTACTTTATGGGTGTTGTGTCTTAGTTGAAGAACTAGTGCACAAACCCTCTGGGTTGCTCTCTCTGAATTCTGATAAACAGCCATCTTACTCTTCTTCGCGACGCCAAATATTTACCACACAAAGATGTTACTGCATTCTTTCAAGGCTTCCATTTTTTGAATTGCACTTTGGTGTATTAAATAGCATCTTCACACAAGAAAGACTAGAGCGATTGACAAAAGGTGCTGGAGATTTGAATTTAGAATTTCTTGAAGGTAGCTATGACGAGGAAAATTCAGAGAGTATGTTGGTGAGTGATAGCCCAATAAACAGATTGGATGAAAATCCAAGAAGTTCCATCCCTGAAAACATCGTGGGTGACGCTCACCAAGAGCACCAAATGGTTAATGGGGAGCTTCAGACATATAAAGAGAAAATTATTTATGACAATGATGTTCCTACCGATCCTAAAACTAATAGGGCAACGACCAAAGAAGAATCTGGCCCTACACATTCTGAGGATGGGACTTCCTACAGTTTCCAAGGATCACCTTGTGAAGACAGAAATTTTAGGAGTGATGTTGATGATAATGAGACAGAAGATGCATCTTTCTCTGGCCAAAAGGATTTAAATGACTTACATGATATTCTTAAGTGGGCCAAGGAAAATAACCATGGACAACTACAGATAATAAGCGAGTATTACCATTTAAATTGCCCTGCTAGGGGCTCAGCCCTTATGTTTCATCCTTTGGAGCACCTGCATCCTTTGGAATATCATAGACTAGCTGAGACAATACAATGTCTTGGGGGTTCAACAGTTGATTTGAAATCTTTCAGTATCGATCTGGAATTAGCCGATGCACATAATGCTCTTCTGGCAGAAGAGGCAACTGCGTTATCTTTATGGGTTGTGGCATGCATGTGTGGCACCTTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGTTCTGCTAGAGAAGCAGATAGTTGTTGTATGTTCTAATTTGGGAATCCTATCTGCTCTAGTTTTATCAGTTATTCCCCTAATCCGACCTTACCAATGGCAAAGCCTGCTGATGCCGGTTTTATCAAATGACATGCTTGAGTTTTTGGATGCACCTGTCCCTTTTGTAGTTGGTATCAAGAACAAGACCAGTGAAGTTCAGTCGAAGTTAACCAATTTTATTATGGTCGATGCCAATAGAAACCAGGTGAAGTCACCAATAATACCACAACTGCCAAGACAGAAAGAGCTAGTCTCTTCTTTACGTCCTTATCATGCAACTCTTGTAGGGGAAAGTTATTTGGGTAGAAGAAGGCCGGTGTATGAATGCACCGAAGTGCAGATTGAAGCTGCAAAGGGGTTCCTTTCAGTGTTAAGATCGTACCTGGATTCTCTTTGCTTTAACATCCGTTCTCACACAATTACCAATGTACAATCCAATGATGATAAGGTATCCTTGCTTTTAAAGGAAAGTTTCATCCACTCATTCCCTAACCGTGATCGGCCTTTTATGAAGCTTTTCGCCGATACACAACTCTTTTCCGTACATACAGATCTTATTCTCTCTTTCTTCCAAAAGCAATAG | 2274 | 0.4125 | MTEIAKEEGSGSPSWGALLFKQTTGDVARAVAAAVNSPSSPVVYSSKDDNGGSQFQRLQHQVTNMIKGFSHPPDVNTNYNPEILTSLKRQWAANFQLQHMDHNSWKEPSRLFESMVVVGLHPNCDVQALGRQYADRKFEGSGKFRSALGYQNQSRIEPNINIEPQVLFVYPPEKRLPLKCKDLLSFCFPGGLEVRAVERTPSLSELNEILFGQEQLKQRDLSFVFRLQGADNSVLYGCCVLVEELVHKPSGLLSLNSDKQPSYSSSRRQIFTTQRCYCILSRLPFFELHFGVLNSIFTQERLERLTKGAGDLNLEFLEGSYDEENSESMLVSDSPINRLDENPRSSIPENIVGDAHQEHQMVNGELQTYKEKIIYDNDVPTDPKTNRATTKEESGPTHSEDGTSYSFQGSPCEDRNFRSDVDDNETEDASFSGQKDLNDLHDILKWAKENNHGQLQIISEYYHLNCPARGSALMFHPLEHLHPLEYHRLAETIQCLGGSTVDLKSFSIDLELADAHNALLAEEATALSLWVVACMCGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSALVLSVIPLIRPYQWQSLLMPVLSNDMLEFLDAPVPFVVGIKNKTSEVQSKLTNFIMVDANRNQVKSPIIPQLPRQKELVSSLRPYHATLVGESYLGRRRPVYECTEVQIEAAKGFLSVLRSYLDSLCFNIRSHTITNVQSNDDKVSLLLKESFIHSFPNRDRPFMKLFADTQLFSVHTDLILSFFQKQ* | 758 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lan1g0428 | 757 | MobiDBLite | consensus disorder prediction | 399 | 413 | - | - | |
| Lan1g0428 | 757 | PANTHER | DENN (AEX-3) DOMAIN PROTEIN | 404 | 756 | - | - | |
| Lan1g0428 | 757 | PANTHER | DENN (AEX-3) DOMAIN PROTEIN | 1 | 405 | - | - | |
| Lan1g0428 | 757 | Pfam | uDENN domain | 164 | 241 | IPR005113 | - | |
| Lan1g0428 | 757 | MobiDBLite | consensus disorder prediction | 325 | 348 | - | - | |
| Lan1g0428 | 757 | MobiDBLite | consensus disorder prediction | 373 | 433 | - | - | |
| Lan1g0428 | 757 | Gene3D | - | 99 | 323 | - | - | |
| Lan1g0428 | 757 | ProSiteProfiles | Tripartite DENN domain profile. | 147 | 757 | IPR037516 | - | |
| Lan1g0428 | 757 | SMART | DENN_cls | 272 | 631 | IPR001194 | - | |
| Lan1g0428 | 757 | SMART | uDENN_cls | 108 | 243 | IPR005113 | - | |
| Lan1g0428 | 757 | Gene3D | - | 530 | 693 | IPR043153 | - | |
| Lan1g0428 | 757 | MobiDBLite | consensus disorder prediction | 415 | 433 | - | - | |
| Lan1g0428 | 757 | Pfam | DENN (AEX-3) domain | 534 | 629 | IPR001194 | - | |
| Lan1g0428 | 757 | PANTHER | SUPPRESSION OF TUMORIGENICITY 5 ST5 | 404 | 756 | - | - | |
| Lan1g0428 | 757 | PANTHER | SUPPRESSION OF TUMORIGENICITY 5 ST5 | 1 | 405 | - | - | |
| Lan1g0428 | 757 | MobiDBLite | consensus disorder prediction | 325 | 344 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lan1g0428 | Lan-Chr1 | 3429650 | 3445114 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lan1g0428 | - | - | lang:109347689 | 1475.3 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lan1g0428 | 1 | 3429650 | 3445114 | Lan1g0428 | 1 | 3429650 | 3445114 | ECH | |
| Lan12g0976 | 12 | 16538020 | 16548809 | Lan1g0428 | 1 | 3429650 | 3445114 | LSH | |
| Lan1g0428 | 1 | 3429650 | 3445114 | Lan14g0117 | 14 | 1467435 | 1479616 | PCT | |
| Lan14g0117 | 14 | 1467435 | 1479616 | Lan1g0428 | 1 | 3429650 | 3445114 | PCT |