Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0976 ATGACTGAAGATGATAAGGAGAAAGGTTCAGGTAGCCCAAGTTGGGGTGCTTTATTATTTAAGCAGACAACCGAGGATGTAGCTAGAGCAGTTGCTGCTAATTCTCCAAATCCATCGGTGATATATTCATCCAAAGATGATAGTGGTGGTAGTCAATTTCAAAGACTGCAGCATCAAGTTACGAATATGATAAAAGGCTTTTCACGCCCAACAGATGTTAATACAAATTACAATCCAGAAATCCTGACTAGTTTGAAGCGTCAATGGGCTGCAAACTTTCAGTTGCAGCACATGGACCATAAGTCATGGAAGGAGCCCTCACGGCTGTTTGAGAGCATGGTGGTTGTTGGACTTCATCCTAATTGTGATGTTCATGCACTGCAAAGGCAATATGTTGATAAAAAGTTTGAAGGCTCTGGCAAATTTAGAAGTGCACTTGGTTATCAAAATCAATCTCGTATAGGACCCAATATCAATATTGAACCTCAGGTCTTATTTGTTTACCCTCCAGAAAAACGGTTGCCTCTTAAATACAAGGATCTTCTTTCTTTCTGCTTCCCAGGAGGCTTGGAGGTTCGTGCTGTGGAGAGAACCCCTTCCATGAGCGAGTTGAATGAAATTCTTTTTGGGCAGGAACACCTTAAACAAAGAGATATGTCATTTGTATTCAGGTTACAGGGTGCTGATAATTCTGTACTTTACGGGTGTTGTGTCTTAGTTGAAGAACTAGTGCACAGACCCTCTGGGTTGCTCTCTCTGGTTTCTGATAAGCAGCCATCTTACTCTTCTTTGAGGCGCCAAATATTTACCACACAGAGATGTTACTGCATTCTTTCGAGGCTTCCATTTTTTGAATTGCACTTTAGTGTATTAAATAGCATCTTCACACAAGAAAGGCTAGAGCGGTTGACAAAAGGTGCTGGAGATTTAAATTTAGAATTTTTTGAAGGTAACTACGAGGGAGAAAATTCAGAAGACAATTTCGAGAGTAAGTTGTTTAGTGATGGAGCAGTAGAAGACAGATTGGATAAAAATCCAAGAGTTTCTCAATCATTCTTAGGAAGTTCCACCGCGGAAAACATTGTGAGTGATGCTCACCAAGAGCACCAAATGGTTACTTATGACATTGTTGTTCCTACCGATCCTGAAACTAATAGGGCAACAGCTGAAGAAGAATCTGGCCCTACAAATTCTGAGGATATTGATCAGTATGGAGGTGCTTTTGCAACCTATAAAATATCAGAAGATAGACATTTACCCAATGCTATTTTCCCCCTCCTGCGCTATTCCCAGTATGAAAGCTCTGAATCTTCCTGCAGTTTCCAAGGCTCTCCTTGTGAAGATGGAAATTTTAGGAGTGATGTTGATGATAATGAGACTGAAGATGCATCTTTCTCTGGCCAAGAGGATTTAAATGACTTACATGATATTCTTAACTGGGCTAAGGAAAATAACCATGGTCAACTACAGATTATAAGCGAGTATTACCATTTAAATTGCCCTGCTAGAGGCTCAACCCTTACATTTCATCCTTTGGACCACCTGCATCCCTTGGAATATCATAGATTAGCTGAGACAGTACAACGTTTTGGGGGTTCAACAGTTGATTTGAAATCTTTCAGTACTGGTCTGGAAATAGCCAATGCACATAATGCTCTTCTGACAGAAGAGGCAACTTCGTTATCTATATGGGCCGTGGCATGCATATGTGGCACCTTGAGACTTGAAAATGTGTTAACATTCTTTGCAGGAGTTTTGTTAGAGAAGCAGATAGTTGTTGTATGTTCTAATTTGGGAATCTTATCTGCTTTAGTTTTATCGGTTATTCCGCTAATCAGGCCTTACCAATGGCAAAGCCTGCTGATGCCGGTTTTACCAAATGACATGCTTGAGTTTTTGGATGCACCTGTCCCTTTTGTAGTTGGTATAAAGAAAAAGAACAGTGAAGTTCAGTTGAAGTTAACCAATGTTATTCTGGTTGATGCCAATAGAAACCAGGTGAAGTCACCAACAATACCACAACTGCCAAGACAAAAAGAGCTAGTCTCTTCTTTACGTTCTTATCATGCAACACTTGTAGGGGAAAGTTACTTGGGTAGAAAAAGGCCAGTATATGAATGCACCGAAGTGCAGACTGAAGCTGCGAAGGGGTTCCTTTCAGTGTTAAGATCATACTTGGATTCTCTTTGCTGTAATATCCGTTCTCACACAATTACCAATGTACAGTCCAATGACGACAAGGTATCCTTGCTTTTAAAGGAGAGTTTCATCGACTCATTCCCTTACCGTGATCGATCTTTTATGAAGCTTTTCGTGGATACACAGCTCTTTTCTGTACATACAGATCTTATTCTCTCCTTCTTCCAGAAGGAATAG 2376 0.4045 MTEDDKEKGSGSPSWGALLFKQTTEDVARAVAANSPNPSVIYSSKDDSGGSQFQRLQHQVTNMIKGFSRPTDVNTNYNPEILTSLKRQWAANFQLQHMDHKSWKEPSRLFESMVVVGLHPNCDVHALQRQYVDKKFEGSGKFRSALGYQNQSRIGPNINIEPQVLFVYPPEKRLPLKYKDLLSFCFPGGLEVRAVERTPSMSELNEILFGQEHLKQRDMSFVFRLQGADNSVLYGCCVLVEELVHRPSGLLSLVSDKQPSYSSLRRQIFTTQRCYCILSRLPFFELHFSVLNSIFTQERLERLTKGAGDLNLEFFEGNYEGENSEDNFESKLFSDGAVEDRLDKNPRVSQSFLGSSTAENIVSDAHQEHQMVTYDIVVPTDPETNRATAEEESGPTNSEDIDQYGGAFATYKISEDRHLPNAIFPLLRYSQYESSESSCSFQGSPCEDGNFRSDVDDNETEDASFSGQEDLNDLHDILNWAKENNHGQLQIISEYYHLNCPARGSTLTFHPLDHLHPLEYHRLAETVQRFGGSTVDLKSFSTGLEIANAHNALLTEEATSLSIWAVACICGTLRLENVLTFFAGVLLEKQIVVVCSNLGILSALVLSVIPLIRPYQWQSLLMPVLPNDMLEFLDAPVPFVVGIKKKNSEVQLKLTNVILVDANRNQVKSPTIPQLPRQKELVSSLRSYHATLVGESYLGRKRPVYECTEVQTEAAKGFLSVLRSYLDSLCCNIRSHTITNVQSNDDKVSLLLKESFIDSFPYRDRSFMKLFVDTQLFSVHTDLILSFFQKE* 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0976 791 ProSiteProfiles Tripartite DENN domain profile. 143 791 IPR037516 -
Lan12g0976 791 MobiDBLite consensus disorder prediction 438 466 - -
Lan12g0976 791 Gene3D - 562 727 IPR043153 -
Lan12g0976 791 SMART uDENN_cls 106 241 IPR005113 -
Lan12g0976 791 Pfam uDENN domain 162 239 IPR005113 -
Lan12g0976 791 Pfam DENN (AEX-3) domain 565 663 IPR001194 -
Lan12g0976 791 Gene3D - 97 306 - -
Lan12g0976 791 MobiDBLite consensus disorder prediction 384 403 - -
Lan12g0976 791 PANTHER DENN (AEX-3) DOMAIN PROTEIN 1 791 - -
Lan12g0976 791 SMART DENN_cls 270 665 IPR001194 -
Lan12g0976 791 PANTHER SUPPRESSION OF TUMORIGENICITY 5 ST5 1 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0976 Lan-Chr12 16538020 16548809 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0976 - - lang:109347689 1270.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0976 12 16538020 16548809 Lan1g0428 1 3429650 3445114 LSH
Lan12g0976 12 16538020 16548809 Lan14g0117 14 1467435 1479616 PCT
Lan14g0117 14 1467435 1479616 Lan12g0976 12 16538020 16548809 PCT