Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0388 ATGGGAACATTTCATAGCTTCAGAAAGGCCTTAGGAGCTCTCAAAGATTCCACCACTGTTGGCTTAGCCAAGGTCAATAGCGAATACAAGGAATTGGATATTGCAATTGTAAGGGCTACCAGTCATGTTGAATATCCTCCTAAGGAACGTCACGTTAGAAAAATATTGTATGCAACAGCAGCAAACCAGCCACGAGCAGATGTGGCATACAGCATACATGCACTTTCCAAGAGGCTTTCCAAGACGCGAAGTTGGATAGTGGCTATAAAGACATTGATAGTAATTCATAGAATTTTAAGAGAGGGTGATCAAACATTCATAGAAGACCTTGCAAAGTACTCACACAAGGGACATATTTTCCAAATGTCCAATTTCAAAGATGACTCTAGCCCCGAAGCATGGGTATGTTCTGCATGGGTTAGAAGCTATGCATTATTTTTAGAAGAAAGACTTGAATGCTTTAAAACCCTTGGATATGACATAGAGACTGAGCGCTTAACCAAATCATCACCGGCTTTGACTAAGGCTCACAGCAGAACACGGACGTTGGGTGGTGATGAGCTGTTGGAGCATCTGCCAGCATTACAGCAACTTCTATACCGCCTTATCGGTTGTGAGCCTGAAGGATCGTCTAACAGCAATTATCTGATACAGTATGCACTGGCCTTGGTATTGAAAGAGAGCTTCAAAATATATTGTGCCCTCAATGATGGAATCATAAATCTTGTGGACATGTTCTTCGAAATGCCGAGACATGAAGCAGTGAAGGCTCTACATGTTTATAAAAGAGCTCGCAAACAGGCTGAACATCTTGCTGATTTCTATGAGTACTGCAAGGGCTTGGATCTTGCAAGGAATTTTCAATTTCCAATCTTGAGACAGCCACCAATCACTTTTATTGCCACAATGGAAGAATACATTAAAGAAGCACCCCAAACAGGCTATGGTCATAAAAGACTGGAAAAAGATCAATCGCCTCATAAAGAACCGGAACCAGAAGAGCCTCGAGCAGATGAGACACAAGCCGAAGAAGTACTCATTGAGGAAGAACCTGTAGAAAAAGAAGAAACACGGCCTAAGGAAGAGGAAGTTGAACCTCCTCCTCTGATATCAACCGATGCAACTTACGATTTGCTGGGTCTAAATGAAATAAATCCGAAATCTCTAGAACTGGAGGAAAGGAATGCTTTAGCACTTGCAATTTTACCACCTGGTGGCAATAATTCAAGCAATCTTGCTTTGGGTAGCATAAGTGGAACATCTGGTTGGGAACTTGCACTTGTTACAACACCAAGTAACCTTACCAGCCAAGCGCCGGTTCGCAAAATGGCTGGTGGGTTTGACAATCTATTACTAGACAGCTTGTACGAGGACGAAAATGCTCGGAGACAACTTCAACTTCGAAATGCAGGTCATGGATATGAAGGAATGGCAACATATAATACACTCAACCATTATAATCAGCATGATCCATTTGCAATGTACAACAACATAGCACCTCCACCCAATGTACAAATGGCATTAATGGCTCAACAACAGCAACAACTACAGCAACAGCAACAAATGATGTTTCAACAACAACAACACAATATGATGATGTTCCCTTACCAACACTCACAAACTCAATACCCTCAACAGAATCAAGTTATTGGTTATTCTAATCCATTTGAAGATCCCTTACCAGTACCTAACCATCCTTATAACTCAATGCCTTATCAAGGGAACTACAATTTACTATAG 1740 0.4144 MGTFHSFRKALGALKDSTTVGLAKVNSEYKELDIAIVRATSHVEYPPKERHVRKILYATAANQPRADVAYSIHALSKRLSKTRSWIVAIKTLIVIHRILREGDQTFIEDLAKYSHKGHIFQMSNFKDDSSPEAWVCSAWVRSYALFLEERLECFKTLGYDIETERLTKSSPALTKAHSRTRTLGGDELLEHLPALQQLLYRLIGCEPEGSSNSNYLIQYALALVLKESFKIYCALNDGIINLVDMFFEMPRHEAVKALHVYKRARKQAEHLADFYEYCKGLDLARNFQFPILRQPPITFIATMEEYIKEAPQTGYGHKRLEKDQSPHKEPEPEEPRADETQAEEVLIEEEPVEKEETRPKEEEVEPPPLISTDATYDLLGLNEINPKSLELEERNALALAILPPGGNNSSNLALGSISGTSGWELALVTTPSNLTSQAPVRKMAGGFDNLLLDSLYEDENARRQLQLRNAGHGYEGMATYNTLNHYNQHDPFAMYNNIAPPPNVQMALMAQQQQQLQQQQQMMFQQQQHNMMMFPYQHSQTQYPQQNQVIGYSNPFEDPLPVPNHPYNSMPYQGNYNLL* 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0388 579 Gene3D - 5 161 IPR008942 -
Lan1g0388 579 SUPERFAMILY ENTH/VHS domain 31 161 IPR008942 -
Lan1g0388 579 Pfam ANTH domain 31 309 IPR011417 GO:0005543
Lan1g0388 579 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 566 IPR045192 GO:0048268|GO:0072583
Lan1g0388 579 SMART enth_2 30 161 IPR013809 -
Lan1g0388 579 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 566 - -
Lan1g0388 579 MobiDBLite consensus disorder prediction 311 372 - -
Lan1g0388 579 ProSiteProfiles ENTH domain profile. 24 161 IPR013809 -
Lan1g0388 579 MobiDBLite consensus disorder prediction 351 367 - -
Lan1g0388 579 Gene3D ANTH domain 174 323 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lan1g0388 579 SUPERFAMILY GAT-like domain 178 309 - -
Lan1g0388 579 MobiDBLite consensus disorder prediction 311 342 - -
Lan1g0388 579 CDD ANTH_N 32 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0388 Lan-Chr1 3060426 3065029 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0388 K20044 - gmx:100815975 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g0388 1 3060426 3065029 Lan1g0388 1 3060426 3065029 ECH
Lan1g0388 1 3060426 3065029 Lan15g0125 15 892889 898914 PCT
Lan1g0388 1 3060426 3065029 Lan14g0146 14 1824207 1829461 PCT
Lan15g0125 15 892889 898914 Lan1g0388 1 3060426 3065029 PCT
Lan14g0146 14 1824207 1829461 Lan1g0388 1 3060426 3065029 PCT