Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0125 ATGGGAACGTTTAGCTTCAAAAAAGCCTATGATGCTTTGAAGGACTCCACTAAAGTTGGCCTTGCCAAAGTCAATAGTGAATACAAGTTGAAGGGGTTGGACATTGCAATTGTAAAGGCTACTAATCACGTGGAATATCCTCCTAAGGAGCGCCATGTTCGAAAAATATTCCATGCAACATCAGCATATCAACCAAGAGCAGATGTAGCATACTGCATTCATAAACTTTCCAAGAGACTTACCAAGACACGAAGTTGGATAGTTGCTGTAAAGACATTGATAGTGATACATAGGACATTGAGGGAGGGTGATCCTACTTTCAGGGAAGAGCTTCTAAACTACTCACAAAGGGGTCATATTTTCCAAATATCCAATTTCAAAGATGACTCAAGCCCTATGGCTTGGGATTGTTCTGCGTGGGTTCGAACCTATGCACTATTTTTAGAAGAAAGACTTGAATGTTATAGAATCCTTAAATATGACATCGAATCTGAGCGTCTAACAAAATCAACATCAGCTGCTACTAAAGCACATAGCAGATCACGGTCGTTGGCGAACGACGATTTGTTGGAGCAGCTACCTGCTCTACAACAACTTTTATACCGCCTCATTGGTTGTCAGCCTGAAGGAAGTGCTTATGGCAATTTCTTAATACAATATGCATCAGCCCTGGTGTTGAAAGAAAGTTTCAAAATATATTGTGCACTCAATGATGGAATCATCAATCTTGTGGACATGTTCTTCGATATGTCGAGACATGACGCGGTGAAGGCGCTAAATATTTATAAAAGAGCTGGCAAGCAGGCCGAATATCTTGCTGACTACTACGAGTACTGCAAAGGCTTGGACCTTGCTCGGAATTTCCAATTTCCGACACTACGACAGCCACCTCCCTCTTTCCTTGCAACAATGGAAGAATACATTAAAGAAGCGCCGCAGACAGGCTCGGTTAATAAGAGACTGGAGTATAAGGAAAATGATCAATCAACTACTTCAGAAGAGTCATCTCCCAAAGAACCTGAAAAGCCTCAAGAAAAAGAGCTGCAAGTTGAAGAAGTAAAAGTAGCAGATGAAGAAAAACAGCCGAAACAGGACGAGGTTGAGCCTCCTCCTTTGATATCGATCGATACAGTTGATCTGCTGGGTCTGAATGAGATAAATCCAAAAGCTCTAGAACTGGAAGATAGCAATGCTTTGGCACTTGCAATTGTACCACCTGGTGGAAACAATCCAAGCAATCTTGCTTTGTGTAACATTGATGGGACAATCGGTTGGGAACTTGCCCTCGTTACGACACCAAGTAACCATACCAGCCAAGCGCTTGATCGAAAATTGGGTGGTGGATTTGACAAGCTATTACTAGATAGTTTGTATGAAGATGACACTGCAAGGAGACAACTTCAACTTCAAAATGCAGGTTATGGGCATGGAGGAATTCCTATACAGAATAACCCATTTGATCAATATAATCATCATGATCCATTTGCAGTTTCCAACAACATAGCACCTCCACCAAATGTGCAAATGGCATTAATGTCTCATCAACAAATGATGTTTCAACAACAACAGCAACAGAATCAAATGATGTTTCAACAACAACAGCAACATAATCCAATGATGTTCCAACAAACACAACACAACATGATGATGGTACCTCAACAACAACAACATAGTCAATACTATCCTCAACATATGCAAATAATGGGCACACATAATCCATTTGGAGATCCTTTACCAGCACCTACCTATCCTCATAGCTCAATGCCCCAACAAGGGAATTACAGTTTAATATAG 1794 0.4091 MGTFSFKKAYDALKDSTKVGLAKVNSEYKLKGLDIAIVKATNHVEYPPKERHVRKIFHATSAYQPRADVAYCIHKLSKRLTKTRSWIVAVKTLIVIHRTLREGDPTFREELLNYSQRGHIFQISNFKDDSSPMAWDCSAWVRTYALFLEERLECYRILKYDIESERLTKSTSAATKAHSRSRSLANDDLLEQLPALQQLLYRLIGCQPEGSAYGNFLIQYASALVLKESFKIYCALNDGIINLVDMFFDMSRHDAVKALNIYKRAGKQAEYLADYYEYCKGLDLARNFQFPTLRQPPPSFLATMEEYIKEAPQTGSVNKRLEYKENDQSTTSEESSPKEPEKPQEKELQVEEVKVADEEKQPKQDEVEPPPLISIDTVDLLGLNEINPKALELEDSNALALAIVPPGGNNPSNLALCNIDGTIGWELALVTTPSNHTSQALDRKLGGGFDKLLLDSLYEDDTARRQLQLQNAGYGHGGIPIQNNPFDQYNHHDPFAVSNNIAPPPNVQMALMSHQQMMFQQQQQQNQMMFQQQQQHNPMMFQQTQHNMMMVPQQQQHSQYYPQHMQIMGTHNPFGDPLPAPTYPHSSMPQQGNYSLI* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0125 597 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 530 IPR045192 GO:0048268|GO:0072583
Lan15g0125 597 SMART enth_2 31 162 IPR013809 -
Lan15g0125 597 Gene3D ANTH domain 174 327 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Lan15g0125 597 SUPERFAMILY GAT-like domain 179 310 - -
Lan15g0125 597 SUPERFAMILY ENTH/VHS domain 32 163 IPR008942 -
Lan15g0125 597 MobiDBLite consensus disorder prediction 576 597 - -
Lan15g0125 597 MobiDBLite consensus disorder prediction 315 371 - -
Lan15g0125 597 ProSiteProfiles ENTH domain profile. 25 162 IPR013809 -
Lan15g0125 597 MobiDBLite consensus disorder prediction 320 366 - -
Lan15g0125 597 CDD ANTH_N 33 155 - -
Lan15g0125 597 PANTHER CLATHRIN ASSEMBLY PLANT-LIKE PROTEIN 1 530 - -
Lan15g0125 597 Pfam ANTH domain 33 310 IPR011417 GO:0005543
Lan15g0125 597 Gene3D - 3 162 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0125 Lan-Chr15 892889 898914 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0125 K20044 - gmx:100783084 854.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0125 15 892889 898914 Lan14g0146 14 1824207 1829461 LSH
Lan1g0388 1 3060426 3065029 Lan15g0125 15 892889 898914 PCT
Lan15g0125 15 892889 898914 Lan1g0388 1 3060426 3065029 PCT