Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan1g0122 ATGGCTGCTTTTCCTCTTTCACTCCTTCTTTTGGCCTTAATAACACCCTATACAAGTGGATCTTGGTGTGTTTGCAAGGATGGGAGTGACACAACACTGCAGAAGACGTTGGATTATGCTTGTGGAGCAGGTGCTGATTGCAACCCTCTTCATCAAAATGGACCTTGTTTCCAACCCAATACTGTGAAGTCTCATTGCAGCTATGCAGTGAATAGTTATTACCAAAAAAAGGGTCAAGCTCCTTTGTCTTGTGACTTTGCTGGAACAGCCACTGTTACTGCATCTGACCCTAGCTCTTCTGGTTGTGCATACCCTTCAAGTGCCAGCACTGCAGGCACTAGCACAACTCCAGTATCAACTACACCAACCATGGGAACCAAACCAACCACTGGAACCCCATCAACAACTACTGGCTCTACCACCACCATTGGAACCACCCCATATGGTGCTACCCCTGGTGTATTAGGAGGCATTGGAACTGGCATGGGTCCTTCAGGATCAGGCATGAACACTGATGAAAGTGATGGTGGAGTTACACTTGTTCACACTAGTTTCCTCTCTCTATTTTCTATTGCTATCTTTTCTGGCTTCATCATGGTTTGGTGGGGTTGA 612 0.4641 MAAFPLSLLLLALITPYTSGSWCVCKDGSDTTLQKTLDYACGAGADCNPLHQNGPCFQPNTVKSHCSYAVNSYYQKKGQAPLSCDFAGTATVTASDPSSSGCAYPSSASTAGTSTTPVSTTPTMGTKPTTGTPSTTTGSTTTIGTTPYGATPGVLGGIGTGMGPSGSGMNTDESDGGVTLVHTSFLSLFSIAIFSGFIMVWWG* 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan1g0122 203 Pfam X8 domain 22 91 IPR012946 -
Lan1g0122 203 Gene3D - 17 117 - -
Lan1g0122 203 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 1 191 - -
Lan1g0122 203 SMART X8_cls 21 104 IPR012946 -
Lan1g0122 203 MobiDBLite consensus disorder prediction 106 146 - -
Lan1g0122 203 PANTHER BETA-1,3 GLUCANASE 1 191 IPR044788 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan1g0122 Lan-Chr1 913996 916598 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan1g0122 18 105 Glycoside Hydrolase AT4G34480 50.562 2.10e-25 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan1g0122 - - gmx:100500078 224.942
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g1230 12 18304447 18307450 Lan1g0122 1 913996 916598 LSH
Lan1g1058 1 20782382 20785861 Lan1g0122 1 913996 916598 LSH