LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lan12g1230	ATGGCTGCTTTTCCTCTTTCACTCCTTCTTTTGGCCTTAATGACACCCTCTACAACCTCAAGTATGTCTTGGTGTGTATGCAAAGATGGGAGCGATGCAACACTGCAGAAGACATTAGACTATGCTTGTGGAGCAGGTGGTGATTGTAACCCACTCCATCAAAACGGACCTTGTTTCCAACCCAACACACTCAAGGCTCATTGTAGCTATGCAGTTAATAGCTATTACCAAAAAAAGGGTCAAGCTCCTATGTCCTGTGACTTTGCTGGAACAGCCACTGTTACTGCAACTAACCCTAGCTCTAGTGGTTGTGCATACCCTTCCAGCGCCAGCACTACAGGCACTAGCACCACTCCTGTGTCTACTACACCAACCATGGGAAGCAACAGCAGCACTACTAGTACTACTCCACATGGTACAACTCCTGGTGTATTAGGAGGCATTGGCACTGGTATGGGGCCTTCAGGATCAGGCAATGATGAAAGTTATGGTGGGCTTAGACTTGTTCACACTAGTTTACTCTCTCCATTTTCTATTGTCCTCTTTTCTGGCTTCATCATGGTTTGGTGGGGTTGA	576	0.467	MAAFPLSLLLLALMTPSTTSSMSWCVCKDGSDATLQKTLDYACGAGGDCNPLHQNGPCFQPNTLKAHCSYAVNSYYQKKGQAPMSCDFAGTATVTATNPSSSGCAYPSSASTTGTSTTPVSTTPTMGSNSSTTSTTPHGTTPGVLGGIGTGMGPSGSGNDESYGGLRLVHTSLLSPFSIVLFSGFIMVWWG*	192

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lan12g1230	191	SMART	X8_cls	23	106	IPR012946	-
	Lan12g1230	191	MobiDBLite	consensus disorder prediction	99	158	-	-
	Lan12g1230	191	Pfam	X8 domain	24	93	IPR012946	-
	Lan12g1230	191	PANTHER	PLASMODESMATA CALLOSE-BINDING PROTEIN 3	1	173	-	-
	Lan12g1230	191	PANTHER	BETA-1,3 GLUCANASE	1	173	IPR044788	-
	Lan12g1230	191	MobiDBLite	consensus disorder prediction	99	141	-	-
	Lan12g1230	191	Gene3D	-	17	123	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lan12g1230	Lan-Chr12	18304447	18307450	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lan12g1230	19	131	Miscellaneous Gene Families	AT2G16230	43.103	3.32e-26	102

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lan12g1230	-		-	gmx:100500078	227.254

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Lan12g1230	12	18304447	18307450	Lan1g1058	1	20782382	20785861	LSH
	Lan12g1230	12	18304447	18307450	Lan1g0122	1	913996	916598	LSH