Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan19g0424 ATGTTCAAGAGAATCATGAAAGGAGGACAAAAAAAGCCCTCCAAATTCGACGCTAACGATCTTAATCCACCGCCAAACGCCCCTAATGTCACCGTTAATCACGCCTCCCGCGGCGCCACTACAAACTCCACCTCCGCTGGCGCCACCGCGATGATGTCGAACCTTCCTCCGGCTTCCGGCACTGTGGAACCGCTCCCTCTCTTCCGCGATGTGCCGGTATCGGAGCGGCAAAACCTCTTCCTCAGAAAATGCCAGATTTGCTGCTACGCCCTTGATTTCTCCGATACTATGAAATCGGTTCGGGAGAAAGAAATCAAAAGACAAACCCTAGTGGAGCTTGTGGATTTCATTCATTCCGGTTCAGGGAAGATAAATGAGAATTGCCAAGAAGAGATGATAAGAATGATTTCGGTTAACATATTCCGGTGCTTGCCGCCAGCATTGCACGAGAACACGGGGCAAGAAACCACCGATCCTGAAGAGGAGGAGCCGTGCTTGGAGCCGGCTTGGCCGCATTTGCAGCTCGTCTATGAGCTTCTCCTCAGATATATTGTTTCATCGGATACGGATACGAAGGTCGCGAAACGGTACATTAATCATTCCTTTGTGCTCAAGTTACTTGATTTGTTTGATTCTGAGGATCCGAGGGAGCGCGAGTATTTGAAAACTATATTGCATCGTATATATGGGAAATTCATGGTTCATAGGCCGTTTATTAGGAAGGCGATCAATAACATATTTTATCGGTTTATTTATGAGACTGAGAGGCATAGTGGTATAGGTGAGCTTTTGGAGATTCTTGGCAGTATAATCAATGGTTTCGCGCTGCCTATGAAGGAGGAGCATAAGTTGTTCCTTGTTAGGGCACTTCTCCCACTGCATAAACCTAAGCCGGTTGCTATGTATCATCAGCAGTTGTCTTACTGTATTTCACAGTTTGTTGAGAAGGATTATAAGCTCGCTGATACAGTTATTAGGGGTTTGTTGAAGTTTTGGCCTGTCACTAATTGCCAGAAGGAGGTTCTCTTCCTTGGGGAGTTGGAGGAGGTGCTGGAGGCCACACAGGCTGCAGAATTCCAACGCTGCATGGTTCCTCTTTTTAGACGGATCACACGCTGCCTCAATAGTCCTCATTTTCAGGTTGCAGAAAGAGCCATCTTTTTATGGAATAATGAGCACATTGTAAGCTTAATTGCTCAAAACAGGACTGTGGTATTGCCGATAATATTTGAAGCGTTGGAGAAAAATATAAAGAGTCACTGGAACCTGGCAGTTAATGGGCTTACTGTGAATGTTAGGAAAATGTTCCTTGAAATGGATGCTGAATTGTTTGAAGAGTGTCAGATTCAGTATGCAGAGAAAGTGGCAAAAGCCGAAGAGGTGGAAGAGCAAAGGGAATTGAATTGGAAGCGATTGACAGAAGCGGCTGGACTGAATAATGGGGTTGAAGATATGGTCACAGTTTAG 1467 0.456 MFKRIMKGGQKKPSKFDANDLNPPPNAPNVTVNHASRGATTNSTSAGATAMMSNLPPASGTVEPLPLFRDVPVSERQNLFLRKCQICCYALDFSDTMKSVREKEIKRQTLVELVDFIHSGSGKINENCQEEMIRMISVNIFRCLPPALHENTGQETTDPEEEEPCLEPAWPHLQLVYELLLRYIVSSDTDTKVAKRYINHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKAINNIFYRFIYETERHSGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKPVAMYHQQLSYCISQFVEKDYKLADTVIRGLLKFWPVTNCQKEVLFLGELEEVLEATQAAEFQRCMVPLFRRITRCLNSPHFQVAERAIFLWNNEHIVSLIAQNRTVVLPIIFEALEKNIKSHWNLAVNGLTVNVRKMFLEMDAELFEECQIQYAEKVAKAEEVEEQRELNWKRLTEAAGLNNGVEDMVTV* 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan19g0424 488 Gene3D - 72 475 IPR011989 -
Lan19g0424 488 SUPERFAMILY ARM repeat 77 454 IPR016024 -
Lan19g0424 488 MobiDBLite consensus disorder prediction 1 47 - -
Lan19g0424 488 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 479 - -
Lan19g0424 488 PIRSF PP2A_B56 6 487 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan19g0424 488 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 479 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan19g0424 488 Coils Coil 444 464 - -
Lan19g0424 488 MobiDBLite consensus disorder prediction 24 47 - -
Lan19g0424 488 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 65 476 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan19g0424 Lan-Chr19 5698553 5704560 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan19g0424 K11584 - gmx:100798308 788.875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0424 19 5698553 5704560 Lan11g1438 11 23541074 23564780 PCT
Lan11g1438 11 23541074 23564780 Lan19g0424 19 5698553 5704560 PCT