Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g1438 ATGTTTAAGAAGATCATGAAGGGAGGAGGAGGGCACAAGAAGCCCTCCAAGTCTGACGATCCATCGGCGGCCAATGTGATCGTCAATCACGCTTCTCGAGGCGGAGGAGCTGGAGGAGTCAATGGAGCATCAGCTGGGACTAATTTAATAGACCCTGCTGCTACTCCGTTGCCAATCCTGCCCCCTTCCGGACCTATGGAACCGCTGCCTATGTTCCGGGATGTCCCGGTTTCCGAAAAACAGAATCTTTTTATTCGAAAACTGCATGTTTGTTGCTACATTCTCGATTTTTTGGATACTATGAAGAATGTTAGGGAGAAGGAGATCAAGAGGCAGGCGTTGATGGACCTTGTGGATTTTATTCGATCCGGTTCAGGGAAGATTACGGAGAATTGCCAAGAGGAAATGATTAGAATGATATCTGTTAACATTTTTCGATGCTTACCGCCTGCTTCGCATGAGAACACCGGACAGGAAGTCACTGATCCTGAAGAGGAGGAGCCTTGTTTGGAACCATCATGGCCACATTTGCAGCTTGTTTATGAATTGCTCCTGAGATATGTGGTTTCGTCGGATACTGATACTAAGGTTGCGAAACGGTACATTGATCACTCATTTGTGCTTAAATTGCTTGATTTGTTTGATTCAGAGGACCCTAGAGAGCGTGAGTATTTGAAAACCATATTGCATCGCATATATGGGAAATTCATGGTTCATAGACCCTTCATTAGGAAGGTGATTAATAACATATTTTATCGGTTTATTTATGAGACTGAGAGGCATTGTGGTATTGGGGAGCTTCTTGAGATTCTTGGTAGTATCATTAATGGGTTTGCTTTGCCAATGAAAGAGGAACATAAGTTGTTCCTTGTGAGGGCGCTTTTGCCTCTGCATAAACCGAAATCTGTTGGTGTTTACCATCAGCAGTTGTCTTACTGTATTACTCAGTTTGTGGAGAAGGATTTCAAGCTGGCGGATACGGTTATTAGGGGATTGTTGAAGTACTGGCCTGTCACCAATTGCCAGAAGGAAGTTCTCTTCCTTGGAGAACTCGAGGAAGTGCTGGAGGCCACACAAGCTGCAGAGTTTCAACGCTGCACGGTTCCCCTTTTTAAACAGATTTCTCGCTGCCTCAATAGTTATCACTTTCAGGTTGCAGAGCGAGCCCTCTTTTTATGGAATAATGAGCACATAGTGAGCTTAATTGCCCAAAACAGGACTGTAGTATTGCCAATAATATTTGAAGCCTTTGAGAAAAATATCCATAGCCATTGGAACCAGGCAGTTCATGGGCTGACCGTGAATGTAAAGAAAATGTTCCTGGAAATGGATGCTGAACTGGTTGAAGAGTGCCAGAGGCAGCACACAGAGAAAGAGTCTAAAGCCAAAGAAGTGGCCGAGCAGCGGGAACTGAATTGGAAGAGGTTGGCTGACGCAGCTGCACAGAACGGGGCGGATGATATGGTCACAATTTAG 1476 0.4492 MFKKIMKGGGGHKKPSKSDDPSAANVIVNHASRGGGAGGVNGASAGTNLIDPAATPLPILPPSGPMEPLPMFRDVPVSEKQNLFIRKLHVCCYILDFLDTMKNVREKEIKRQALMDLVDFIRSGSGKITENCQEEMIRMISVNIFRCLPPASHENTGQEVTDPEEEEPCLEPSWPHLQLVYELLLRYVVSSDTDTKVAKRYIDHSFVLKLLDLFDSEDPREREYLKTILHRIYGKFMVHRPFIRKVINNIFYRFIYETERHCGIGELLEILGSIINGFALPMKEEHKLFLVRALLPLHKPKSVGVYHQQLSYCITQFVEKDFKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQAAEFQRCTVPLFKQISRCLNSYHFQVAERALFLWNNEHIVSLIAQNRTVVLPIIFEAFEKNIHSHWNQAVHGLTVNVKKMFLEMDAELVEECQRQHTEKESKAKEVAEQRELNWKRLADAAAQNGADDMVTI* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g1438 491 SUPERFAMILY ARM repeat 81 462 IPR016024 -
Lan11g1438 491 PANTHER PROTEIN PHOSPHATASE 2A REGULATORY B SUBUNIT FAMILY PROTEIN 1 485 - -
Lan11g1438 491 Pfam Protein phosphatase 2A regulatory B subunit (B56 family) 69 480 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan11g1438 491 PIRSF PP2A_B56 61 490 IPR002554 GO:0000159|GO:0007165|GO:0019888
Lan11g1438 491 Coils Coil 448 468 - -
Lan11g1438 491 Gene3D - 76 479 IPR011989 -
Lan11g1438 491 MobiDBLite consensus disorder prediction 1 23 - -
Lan11g1438 491 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 2A PP2A REGULATORY SUBUNIT B 1 485 IPR002554 GO:0000159|GO:0007165|GO:0019888
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g1438 Lan-Chr11 23541074 23564780 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g1438 K11584 - gmx:100814538 814.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan19g0424 19 5698553 5704560 Lan11g1438 11 23541074 23564780 PCT
Lan11g1438 11 23541074 23564780 Lan19g0424 19 5698553 5704560 PCT