Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1125 ATGTTTTGTGCAACCACCACCCATTTTTCAACCACCACAATAATAAGATCTCTCCCTTTTAATTTCAACCTACATTTCCATTCTCTTTCTCTTCTTCAAGAAACTAAAAAGGAAGGAAGCAGGGGAAGAGAATTATCGGGCGTAATGGCTTCTGAGAGGGAAAGTTTTGACTTCTCAGGACCCCTACATTTACTCTATATCGATTGGGATAATATGTATCATCGAAAGTCAGTGGCTGCTAGTTTGGTCCAAGGTGTCTACGTTCTAGAAAAGGACCGGCAAGAACGACGCCAAGGTGCCAATGCTCTTGCACCACCTTGGTGGGTGTTCTTCAACTTTCAGTTGCACAGTACACTTGTTGATGATGTTGATTCTTCCATCTTTGGTGCAATCTATGAGTTCAACCCTTCATCATCTAAGTGCAATGACAATTTACATAGAAGTCCACGTTATGTGATTGCCTTTAGAGGGACTATAACCAAGGCAGACTCAGTTTCACGTGATATTGAATTAGATATGCACTTCGTCAGAAATGGCCTTCATCAAACTTCTCGTGCCGAGATAGCTATCCAAGCTGTTAGAAACATGGTAGCTAGTCTTGGTGATACACATATCTGGTTGGCTGGTCACTCTTTAGGATCAGCAATGGCTATGCTTACTGGGAAAACAATGGCCAAGAGTAGCATTTTTATTGAGTCTTTTCTTTTTAACCCTCCATATGTATCTGCTCCAATTGAGAGAATTAAGGATAAGAAAGTGAAACACGGTCTTAGAATTGCAAGCAGTGTCATAACAGCTGGACTCACCATTGCTATGAAGGCTAAGCAGCATAAGAAGGGATTGTCCTCCTCCTTCGATTCCTTTGATTCTTTGTCTGCATGGGTACCATGCTTGTTTGTGAATCCATCTGACCCTATTTGCTCAGAGTATAAGGGATACTTTGAACACAGAAGAAAAATGGAGGAGATTGGCGCAGGAAGCATTGAAAGGCTAGCAACTCAAAATTCCATTGGTTGTTTAGTTATGAGTGCATTTGGGAAGGAATCTGAACCCTTGCACCTCATTCCTTCAGCTTCTCTTACAGTTAATTTGTCTCCTTCAAGGGATTTTAGAGAAGCGCATGGGATTCACCAATGGTGGAAACCTGACTTGTGCCTCGAATCCAAGCTCTACAAATATTAA 1182 0.4162 MFCATTTHFSTTTIIRSLPFNFNLHFHSLSLLQETKKEGSRGRELSGVMASERESFDFSGPLHLLYIDWDNMYHRKSVAASLVQGVYVLEKDRQERRQGANALAPPWWVFFNFQLHSTLVDDVDSSIFGAIYEFNPSSSKCNDNLHRSPRYVIAFRGTITKADSVSRDIELDMHFVRNGLHQTSRAEIAIQAVRNMVASLGDTHIWLAGHSLGSAMAMLTGKTMAKSSIFIESFLFNPPYVSAPIERIKDKKVKHGLRIASSVITAGLTIAMKAKQHKKGLSSSFDSFDSLSAWVPCLFVNPSDPICSEYKGYFEHRRKMEEIGAGSIERLATQNSIGCLVMSAFGKESEPLHLIPSASLTVNLSPSRDFREAHGIHQWWKPDLCLESKLYKY* 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1125 393 Pfam Lipase (class 3) 183 227 IPR002921 GO:0006629
Lan18g1125 393 SUPERFAMILY alpha/beta-Hydrolases 96 247 IPR029058 -
Lan18g1125 393 PANTHER LIPASE CLASS 3-LIKE 50 393 - -
Lan18g1125 393 Gene3D alpha/beta hydrolase 113 258 IPR029058 -
Lan18g1125 393 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 50 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1125 Lan-Chr18 16210728 16213419 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g1125 49 327 Acyl Lipid Metabolism Gene Families AT2G05260 55.245 9.49e-112 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1125 - - lang:109332786 784.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1125 18 16210728 16213419 Lan18g1125 18 16210728 16213419 ECH
Lan18g1125 18 16210728 16213419 Lan6g0073 6 491343 494543 LSH
Lan18g1125 18 16210728 16213419 Lan17g1040 17 15766440 15769413 PCT
Lan18g1125 18 16210728 16213419 Lan6g1215 6 12272769 12274913 PCT