Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1040 ATGGATTCTGAGAGTGAAATTTTTGACCTCTCAGGACCATTGTATCTGACTTATGTCTTATGGGATAATCCGTATCATCGAATGTCAGTTGCTGCTAGCTTGGTACAAGGTGTTTACATTCTAGAAAGGGACCGGCAAGAAAAACGAGAAGGTCCTGATGTTCTTGCACCACCTTGGTGGAAATTCTTCCACTTTCAATTACTCCGTCCACTTGTCGATGATGTCGATTCTTCCATCTTTGGGGCAGTCTATGAGTTCAAGCCTCCATCATCTCAGGACAATGACACTTTATACAGAAGTCCACGCTATGTGATTGCATTTCGAGGGACTCTAACTAAATCGGACTCAGTTTCACGTGATATCGCATTGGATATCCACTTTATCCGACAAGGGCTTCATCAAACTTCTCGTGGTGACATAGCAATTCAAGCTGTTCGAAACATGGTAGAAACCGTAGGTGATTCAAATGTTTGGTTGGCAGGGCATTCCCTTGGATCAGCAATGGCGATGCTTACTGGGAAAACCATGGCCAAGTCTGGCATGTTCCTCGAATCCTTCCTTTTCAACCCGCCATTCGTGTCTGCTCCAATTGAGAGAATTAAAGATGAGAAAGTGAAACATGGGATTCGATTTATGGGCAGTGTGATAACTGCTGGACTCACCATTGCTATGCAAGCTAAGCAGCCGAAGGACTTATCTGTCGATCCATTTGCTGCTTTGGCTGCTTGGGTTCCATTTTTATTTGTTAATCCATCTGACCATATCTGCTCAGAGTATATCGGATACTTCGAACACAGAAGAAAAATGGATGAGATTGGAGCAGGAGTTATTGAAAGGTTAGCAACTCAAAATTCTCTTGGTGGCCTTCTAATGAGTGCATTTGGGAAGGAATCTGAACCTCTGCACCTCATTCCTTCAGCTTCTGTAACAGTTAATGTTGGTCCTACACATGATTTTCAAGATGCTCATGGGATTCATCAGTGGTGGAAACCTGACTTGCGCCTGGAACACAAGCTCTACAATTACAAATAG 1032 0.4341 MDSESEIFDLSGPLYLTYVLWDNPYHRMSVAASLVQGVYILERDRQEKREGPDVLAPPWWKFFHFQLLRPLVDDVDSSIFGAVYEFKPPSSQDNDTLYRSPRYVIAFRGTLTKSDSVSRDIALDIHFIRQGLHQTSRGDIAIQAVRNMVETVGDSNVWLAGHSLGSAMAMLTGKTMAKSGMFLESFLFNPPFVSAPIERIKDEKVKHGIRFMGSVITAGLTIAMQAKQPKDLSVDPFAALAAWVPFLFVNPSDHICSEYIGYFEHRRKMDEIGAGVIERLATQNSLGGLLMSAFGKESEPLHLIPSASVTVNVGPTHDFQDAHGIHQWWKPDLRLEHKLYNYK* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1040 343 Gene3D alpha/beta hydrolase 82 200 IPR029058 -
Lan17g1040 343 PANTHER LIPASE CLASS 3-LIKE 3 342 - -
Lan17g1040 343 Pfam Lipase (class 3) 142 182 IPR002921 GO:0006629
Lan17g1040 343 SUPERFAMILY alpha/beta-Hydrolases 18 197 IPR029058 -
Lan17g1040 343 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 3 342 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1040 Lan-Chr17 15766440 15769413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1040 1 275 Acyl Lipid Metabolism Gene Families AT2G05260 57.193 3.43e-114 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1040 - - gmx:100812620 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g1040 17 15766440 15769413 Lan6g1215 6 12272769 12274913 LSH
Lan18g1125 18 16210728 16213419 Lan17g1040 17 15766440 15769413 PCT
Lan6g0073 6 491343 494543 Lan17g1040 17 15766440 15769413 PCT