Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g1102 ATGGCGTTGCAAGAAAAGCTAGATAGATTCAAAAAGCAGCAAGAGAAGTGTCAATCGACGCTTGTTTCTACGAAAGCTGCTCAAACCCTAAAATCACCATCTTCATCATCTACCAATGGAAGAGTTACTCCAATTCCTTCTGTCAAATTCTCAAACGATACTGAGAGGCTTCAACATATTAACTCTATTCGCAAAGCCCCCGTTGGTGCTCAGATGAAGCGTGTTATTGATCTCCTCTTTGAGACCCGTCAGGCTTTAACACCAGACCAGATTAATCAAGTATGCTATGTGGACATGAATGCTAATAGAAATGTTTTTGAAAGTATGAGGAAAAACCCTAAAATTAAATATGATGGGGAACGATTCTCTTACAAGTCGAAGCATGATGTTAGGGATAAAAAAGAGCTGCTTGTCCTGATACGAAAGTATCTAGAGGGCATTGCTGTTATTGACTTAAAGGATTCTTACCCAACTGTGATGGAGGACTTGCAGGCTTTAAAAGCTGCAGGGCAGATTTGGCTTCTGTCCAACTTTGATTCACAGGAAGACATTGCTTACCCCAATGACCCCCGAGTCCCTATTAAGGTGGATGATGACCTAAAACTGCTCTTTCGGGGGATTGAATTGCCTCGTGATATGCTTGATATAGAGAAGGATCTCCTAAAGAATGGAATGAAGCCTGCTACTAACACCGCAAAGAGGAGGAGCACAGCACAAATGGAAGGCATTCCTGCCTCCAAGTCCAAGCCTAAGAAGAAGAACAAAGAAATCAGCAAGAGGACCAAGCTGACTAACGTCCATCTTCCAGAGCTTTTTCAGAATTTAAAGGGCGACTGA 837 0.4241 MALQEKLDRFKKQQEKCQSTLVSTKAAQTLKSPSSSSTNGRVTPIPSVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRQALTPDQINQVCYVDMNANRNVFESMRKNPKIKYDGERFSYKSKHDVRDKKELLVLIRKYLEGIAVIDLKDSYPTVMEDLQALKAAGQIWLLSNFDSQEDIAYPNDPRVPIKVDDDLKLLFRGIELPRDMLDIEKDLLKNGMKPATNTAKRRSTAQMEGIPASKSKPKKKNKEISKRTKLTNVHLPELFQNLKGD* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g1102 278 MobiDBLite consensus disorder prediction 24 46 - -
Lan18g1102 278 MobiDBLite consensus disorder prediction 225 263 - -
Lan18g1102 278 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 56 131 IPR003166 GO:0006367
Lan18g1102 278 PANTHER BNAA02G21830D PROTEIN 1 276 - -
Lan18g1102 278 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 276 IPR016656 GO:0005673|GO:0006367
Lan18g1102 278 Pfam TFIIE beta subunit core domain 70 130 IPR003166 GO:0006367
Lan18g1102 278 Pfam TFA2 Winged helix domain 2 131 188 IPR040501 -
Lan18g1102 278 MobiDBLite consensus disorder prediction 229 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g1102 Lan-Chr18 16083800 16089580 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g1102 K03137 - gmx:100802433 421.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1102 18 16083800 16089580 Lan18g1102 18 16083800 16089580 ECH
Lan18g1102 18 16083800 16089580 Lan18g0225 18 2337854 2341164 PCT