Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0225 ATGTCATTGCAAGAGAGTTTAGAGAGATTCAAGAAGCAACAAGAAAAGTGTCATTCAACACTTTCAAGCATTGCAAATGGAAGAAATTCAGTTCCTCCTCTTCCTTCTGGTGTTGCTGTTAAATTCTCCAACGATACGGAGCGGCTTCAGCATATTAACAGCATTCGCAAAGCTCCGGTTGGTGCTCAGATGAAGCGTGTTATCGATCTCTTATTCGAGACCCGACATGCTTTTACACCAGAGCAAATAAATGAAGCATGCTATGTTGACATGAAGGCTAACAAAGATGTTTTTGACAGTCTGAGGAAAAATCCAAAAGTGAAGTATGATGGGCAACGATTCTCTTACAAGTCAAAGCATAACCTTAAGGACAAAAATCAGCTTCTTCAGCTGATACGCAAGTTTCCAGAGGGTATTGCTGTTATTGACCTAAAAGATTCTTACCCAACTGTGATGGAGGACCTTCAGGCTTGGAAAGCCGCAGGGCAGATTTGGCTGCTGTCCAACTTTGATTCACAGGAAGACATTGCATACCCTAATGACCCCAAAGTGCCCATTAAGGTGGATGATGACCTAAAACAGCTTTTTCGGAGTATCGAGTTGCCTCGCGATATGATTGATATAGAAAAAGACCTTCAGAAGAATGGAATGAAGCCCGCCACCAACACTGCAAAGAGAAGAAGTGCAGCGCAAATTCAAGGTGCTTCTCCCAAGCCGAAGACTAAGAAGAAGAAGAGTGAAATCAGCAAGAGGACCAGGCTGACCAATGCTCATCTTCCTGAGCTTTTTCAGAACTTGAACAGTTCTTGA 810 0.4296 MSLQESLERFKKQQEKCHSTLSSIANGRNSVPPLPSGVAVKFSNDTERLQHINSIRKAPVGAQMKRVIDLLFETRHAFTPEQINEACYVDMKANKDVFDSLRKNPKVKYDGQRFSYKSKHNLKDKNQLLQLIRKFPEGIAVIDLKDSYPTVMEDLQAWKAAGQIWLLSNFDSQEDIAYPNDPKVPIKVDDDLKQLFRSIELPRDMIDIEKDLQKNGMKPATNTAKRRSAAQIQGASPKPKTKKKKSEISKRTRLTNAHLPELFQNLNSS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0225 269 ProSiteProfiles TFIIE beta central core DNA-binding domain profile. 48 123 IPR003166 GO:0006367
Lan18g0225 269 MobiDBLite consensus disorder prediction 216 230 - -
Lan18g0225 269 PANTHER BNAA02G21830D PROTEIN 1 268 - -
Lan18g0225 269 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNIT 1 268 IPR016656 GO:0005673|GO:0006367
Lan18g0225 269 MobiDBLite consensus disorder prediction 213 269 - -
Lan18g0225 269 Pfam TFIIE beta subunit core domain 62 121 IPR003166 GO:0006367
Lan18g0225 269 Pfam TFA2 Winged helix domain 2 123 180 IPR040501 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0225 Lan-Chr18 2337854 2341164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0225 K03137 - gmx:100802433 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g1102 18 16083800 16089580 Lan18g0225 18 2337854 2341164 PCT