Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0787 ATGGCCCCCACGGTTTATTCCCGCACTTTGCTCGACGCTAAAAACGAACAAGAGCTTCTTTCCGGATTAAAGAAGGAAGTAGAAGCAGGATCTCTGCCCCCTAATGTTGCTGCGGGGATGGAAGAATTGTACAACAACTATAAAAATGCTGTTTTCCAAAGTGGAGATCCCAAGGCAAATGAGACTGTGCTGTCAAATATGACTGTTTTTCTAGATCTCATATTTTTGGATGTGACGGATCCCTTTGTCTTTCAACCACACCACAAAGCAAAGAGAAAGCCTTTTGACTACTACATGTTTGGTCAAAATTATATCCGCCCTTTAGTTGATTACAGAAATTCTTATGTTGGCAACATGTCCCTTTTCATTGAAATAGAAGAGAAACTTAAGAAGGGACACAATATCATCTTCATGTCAAACCACCAAACTGAAGCAGATCCAGCAATTATTTCACTGTTGCTTGAAAAGCAACTGCCATATATCGCTGAAAACATGATGTATGTAGCAGGTGATAGAGTTGTAACTGATCCTGTGTGCAAACCCTTCAGTATTGGCAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCGGAACTCATAGAGATGAAAAGAAAAGCAAACACACAAAGTCTGAAGGAGATGGCTGTGCTTTTAAGGGGTGGATCACAACTAATCTGGATTGCCCCAAGTGGTGGTAGGGATCGACAAGATCCCCACACTGGAGAATGGGCGCCGGCACCCTTTGATGCTTCTTCAGTTGATAACATGCGAAGGCTTGTTGACCATTCTGGTCCACCAGGTCATGTATATCCTTTGGCAATATCATGCCATGAGATAATGCCCCCTCCAATGAAGGTTGAAAAAGAAATTGGGGAGAAAAGACTTATTTCTTTTCATGGAACTGGCTTATCAGTTGCTCCAGAGATAAGCTTTTCTGAAACTACTGCTGCTTGTGAAAGTCCAGAAAAGCAGGCTAAGGAATCATATTCAAAAGCCTTGTACGACTCCGTGAATGAGCAATATAATGTGCTAAAATCTGCAATACGAGGCAAAAAAGGATTAGAAGCATCAACTCCTAAAGTTTCTTTGTCACAGCCATGGAACTAG 1119 0.4155 MAPTVYSRTLLDAKNEQELLSGLKKEVEAGSLPPNVAAGMEELYNNYKNAVFQSGDPKANETVLSNMTVFLDLIFLDVTDPFVFQPHHKAKRKPFDYYMFGQNYIRPLVDYRNSYVGNMSLFIEIEEKLKKGHNIIFMSNHQTEADPAIISLLLEKQLPYIAENMMYVAGDRVVTDPVCKPFSIGRNLICVYSKKHMLDDPELIEMKRKANTQSLKEMAVLLRGGSQLIWIAPSGGRDRQDPHTGEWAPAPFDASSVDNMRRLVDHSGPPGHVYPLAISCHEIMPPPMKVEKEIGEKRLISFHGTGLSVAPEISFSETTAACESPEKQAKESYSKALYDSVNEQYNVLKSAIRGKKGLEASTPKVSLSQPWN* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0787 372 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 5 372 - -
Lan18g0787 372 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 5 372 IPR016222 GO:0004366|GO:0006650
Lan18g0787 372 Gene3D - 81 363 - -
Lan18g0787 372 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 6 371 - -
Lan18g0787 372 Pfam Glycerol-3-phosphate acyltransferase N-terminal 7 82 IPR023083 GO:0004366
Lan18g0787 372 PIRSF G3POAT 1 372 IPR016222 GO:0004366|GO:0006650
Lan18g0787 372 SMART plsc_2 135 281 IPR002123 GO:0016746
Lan18g0787 372 Pfam Acyltransferase 123 279 IPR002123 GO:0016746
Lan18g0787 372 CDD LPLAT_GPAT 112 348 - -
Lan18g0787 372 Gene3D - 6 80 IPR038114 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0787 Lan-Chr18 13319357 13329375 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0787 6 372 Acyl Lipid Metabolism Gene Families AT1G32200 71.117 0.0 574
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0787 K00630 - gmx:100800190 628.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0787 18 13319357 13329375 Lan18g0787 18 13319357 13329375 ECH
Lan17g0517 17 4021516 4030214 Lan18g0787 18 13319357 13329375 LSH