Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0517 ATGACCACTTCTAACACTTACTTTTCTTCTTCTCTTCCTTTCTCTTCTTCTCTACGCCTCACTAATAAGACTAGGACTATGTCTATTTTCTCTCCATCGTTATCCACACTCTTCGCTACTCCAACTCTTAGGGTTTCTTCTTTTTCTTTTTCTTCAATCTATTCGAGATCTGTAACCGCTTCTTCATCTGTTGTTGCTGTTTCTTCTTCTTCATCGCTCTTCTCTATCAAAGGTGAAGACAACGCTGCTTCACCCAAAGATTATTTTCCCGCCAAAATGTCAGCTACTGTTTCTTCTCGCACTTTTCTTGACGCTCAAAGCGAACAAGAGCTTCTTTCTGGAATAAGGAACGAAGTAGAATCAGGATCCCTGCCTCCTAATGTTGCTGCAGGGATGGAAGAACTGTACGAGAACTACAAAAGTGCGGTTTTCCAAAGTGGAGATCCCAAGGCAGATGAGACTGTATTGTCAAATATGTCTGGTCTTTTAGATCGCATATTTTTGGATGTGACGGATCCTTTTGTCTTTCAACCACACCACAAAGCAAAGAGAGAGCCTTTTGACTACTACATGTTTGGTCAAAACTATATCCGCCCTCTAGTTGATTACAGAAATTCTTATGTTGGCAACATGCCCCTTTTCATTGAAATAGAAGAGAAACTTAAGCAGGGACACAATATCATCTTGATGTCAAATCACCAAACTGAAGCAGATCCAGCAATTATTTCGCTGCTGCTTGAAAAGCGACTACCATATATTGCTGAAAACTTGACTTACGTAGCCGGAGATAGAGTTATAACAGATCCTCTATGCAAGCCCTTCAGTATTGGCAGGAATCTCATTTGTGTTTACTCTAAAAAGCACATGCTTGATGATCCGGAACTTATAGAGATGAAAAGAAAAGCCAACACACGAAGTCTGAAGGAGATGGCTATGCTTTTAAGGAGCGGATCACAATTAATCTGGATTGCCCCAAGTGGTGGTAGGGATCGACCAGATCCCACTAATGGAGAATGGTTTCCGGCACCCTTCGATCCTTATTCAGTTGATAATATGCGAAGGCTTGTTGACCATTCTGGCCCACCAGGTCATGTATATCCTTTGGCATTATTGTGCCATAATATAATGCCCCCTCCGATGAAGGTTGAAAAGGAAATTGGGGAGAAAAGAGTTATTTCTTTTCATGGGACTGGCTTATCAGTGGCTCCAGAGATAAGCTTTTCTGAAACAACTGCTGCTTGTGAAAGTCCAGAAAAGGCTAAGGATGCATATTCAAAAGCCGTATACATTTCTGTGAATGAGCAATATAATGTGCTAAAATCTGCAATACACGGCAAAAAAGGATTAGAAGCATCAACTCATAAAGTTTCTTTGTCGCAGCCATGGAACTAG 1392 0.4109 MTTSNTYFSSSLPFSSSLRLTNKTRTMSIFSPSLSTLFATPTLRVSSFSFSSIYSRSVTASSSVVAVSSSSSLFSIKGEDNAASPKDYFPAKMSATVSSRTFLDAQSEQELLSGIRNEVESGSLPPNVAAGMEELYENYKSAVFQSGDPKADETVLSNMSGLLDRIFLDVTDPFVFQPHHKAKREPFDYYMFGQNYIRPLVDYRNSYVGNMPLFIEIEEKLKQGHNIILMSNHQTEADPAIISLLLEKRLPYIAENLTYVAGDRVITDPLCKPFSIGRNLICVYSKKHMLDDPELIEMKRKANTRSLKEMAMLLRSGSQLIWIAPSGGRDRPDPTNGEWFPAPFDPYSVDNMRRLVDHSGPPGHVYPLALLCHNIMPPPMKVEKEIGEKRVISFHGTGLSVAPEISFSETTAACESPEKAKDAYSKAVYISVNEQYNVLKSAIHGKKGLEASTHKVSLSQPWN* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0517 463 Gene3D - 97 172 IPR038114 -
Lan17g0517 463 Pfam Acyltransferase 215 368 IPR002123 GO:0016746
Lan17g0517 463 Gene3D - 173 454 - -
Lan17g0517 463 PIRSF G3POAT 1 463 IPR016222 GO:0004366|GO:0006650
Lan17g0517 463 SMART plsc_2 227 373 IPR002123 GO:0016746
Lan17g0517 463 CDD LPLAT_GPAT 204 439 - -
Lan17g0517 463 PANTHER GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE, CHLOROPLASTIC 61 463 IPR016222 GO:0004366|GO:0006650
Lan17g0517 463 SUPERFAMILY Glycerol-3-phosphate (1)-acyltransferase 99 462 - -
Lan17g0517 463 Pfam Glycerol-3-phosphate acyltransferase N-terminal 99 174 IPR023083 GO:0004366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0517 Lan-Chr17 4021516 4030214 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g0517 57 463 Acyl Lipid Metabolism Gene Families AT1G32200 68.305 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0517 K00630 - gmx:100789434 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0517 17 4021516 4030214 Lan18g0787 18 13319357 13329375 LSH