Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0610 ATGTTTTTCTCATTATTCTATCCATTCATGTTTTGCAAATCCAGTTTCACCAATCTATTGGACATGGATTATCACTATATTCTTGGAGGGGTTCTAGTTTCAAGTTTAACTGTTGTGTATTTTATGTACAATTTTGCAAAAAAGAAGGGTGCAAGTTCAAGATCAATGCATGTGTTAGAAAGCAATGAAGAGATTGAAGGAAGCACAGATATCATCATTGTAGGTGCTGGGGTTGCTGGTGCAGCCCTTGCTTACACACTAGGAAAGGATGGAAGGAGGGTGCATGTCTTTGAAAGGGACTTGAGTGAACCTGATAGGATTGTAGGTGAATATCTACAGCCTGGTGGTTATCTGAAGTTGTTTGATTTAGGTCTTGAGGATTGTGTGAGTGAAATTGATGCTCAAGAAGTTTTTGGTTATGCTCTTTCTAAGGATGGAAAAGATACCAAGCTACCTTATCCCTTGGAAAAGTTTAGCTCTGATGTTTCTGGTAGAGGCTTTCACAATGGCCGTTTCATACAAAGAATGAGAGAAAAGGCTGCATCTCTTCAAAATGTAAAATTAGAACACGGAACTGTCACATCTCTACTTAAAGAAAATGGAACCATCAAAGGGGTGAACTACAAAACCAAGAGTGGCCAAGAGTTCACAGCAAAGGCTCCACTCACTATAGTATGTGATGGTTGTTTTTCCAACTTGAGGCGTTCTCTTTGCAACCCTAAGGTTGAAGTACCCTCTCATTTTGTTGGTCTGGTCCTGGAGAATTGTAATCTTCCATATGCAAACTTTGGACAGCTTATCGTCGGTGATCCTTCGCCCATTGTGTTTTATCCCATTAGCAGCACTGAGATTCGGTGTTTGGTAGATGTGCCTGGCCAAAAATTACCTTCCCTTGGCAATGGTGAAATGGCCCAGTATTTGAAAACTCTGGTAGCTCCCCAGGTTCCACCAGAGCTGTATAATTCTTTTAATGCAGCAGTTGATAAGGGAAACATCAGAACCATGCCAAATAGAAGCATGCCTGCCTCACCTTATCCCACACCTGGTGCCCTTCTGATGGGAGACGCCTTCAATATGTGCCACCCTTTAACAGGAGGAGGAATGACCGTGGTTTTGTCTGACATTGTTGTGCTAAGGGATCTACTTAAACCTGTGCATGATTTGCATGATTCTTCTGCTCTTTGCAAATACCTTGAATCATTCTACACCCTGCGCAAGCCAGTGGCATCTACAATAAATACATTATCTGATGCCTTGTACAAGGTGTTTTGTGCATCCCCTGACCCAGCTAGGAAGGAAATGCGCCAGGCATGTTTCGATTATTTGAGCCTAGGAGGTGTTTTCTCAGATGGACCAACAGCTCTACTCTCTGGTCTAAATCCTAGTCCACTGATCTTGGTTCTCCATTTCTTCGCGATGGCTGTTTATGGCGTCGGCCGCCTGTTTATACCATTTTCTTCTCCAAAGAAAATGTGGATAGGAGTTAGAATGATTTCAAGTGCATCAGGTATCATTTTCCCCATTATCAAGGCTGAAGGAGTGAGACAAATGTTATTTCCAGCAACTGTGCCAGCATATTACAGAACACCTCCTGTCTATTAG 1602 0.4232 MFFSLFYPFMFCKSSFTNLLDMDYHYILGGVLVSSLTVVYFMYNFAKKKGASSRSMHVLESNEEIEGSTDIIIVGAGVAGAALAYTLGKDGRRVHVFERDLSEPDRIVGEYLQPGGYLKLFDLGLEDCVSEIDAQEVFGYALSKDGKDTKLPYPLEKFSSDVSGRGFHNGRFIQRMREKAASLQNVKLEHGTVTSLLKENGTIKGVNYKTKSGQEFTAKAPLTIVCDGCFSNLRRSLCNPKVEVPSHFVGLVLENCNLPYANFGQLIVGDPSPIVFYPISSTEIRCLVDVPGQKLPSLGNGEMAQYLKTLVAPQVPPELYNSFNAAVDKGNIRTMPNRSMPASPYPTPGALLMGDAFNMCHPLTGGGMTVVLSDIVVLRDLLKPVHDLHDSSALCKYLESFYTLRKPVASTINTLSDALYKVFCASPDPARKEMRQACFDYLSLGGVFSDGPTALLSGLNPSPLILVLHFFAMAVYGVGRLFIPFSSPKKMWIGVRMISSASGIIFPIIKAEGVRQMLFPATVPAYYRTPPVY* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0610 533 Pfam NAD(P)-binding Rossmann-like domain 73 99 - -
Lan18g0610 533 SUPERFAMILY FAD/NAD(P)-binding domain 69 444 IPR036188 -
Lan18g0610 533 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 70 92 - -
Lan18g0610 533 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 219 234 - -
Lan18g0610 533 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 347 362 - -
Lan18g0610 533 PRINTS Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 362 378 - -
Lan18g0610 533 PANTHER SQUALENE MONOOXYGENASE 22 532 IPR040125 GO:0004506|GO:0016126
Lan18g0610 533 Pfam Squalene epoxidase 219 489 IPR013698 GO:0004506|GO:0016021|GO:0050660
Lan18g0610 533 Gene3D - 63 451 IPR036188 -
Lan18g0610 533 PANTHER SQUALENE MONOOXYGENASE-RELATED 22 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0610 Lan-Chr18 11164414 11168430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan18g0610 48 531 Miscellaneous Gene Families AT1G58440 75.000 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0610 K00511 - gmx:100808856 852.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan18g0610 18 11164414 11168430 Lan18g0610 18 11164414 11168430 ECH
Lan18g0610 18 11164414 11168430 Lan4g0723 4 9537548 9542165 PCT
Lan4g0723 4 9537548 9542165 Lan18g0610 18 11164414 11168430 PCT