Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan18g0027 ATGCTTTGGAGTGATTCTACTAGAGAAGGTTTTGGTTTGTTCAGAAGAGTATTGAAGAGGACATGCAGCATGTTCTTGGCTATGGACATGAAGAGACTTGCATTCTCTGAGCCATTTTTGTCACATAGAAGAAAAGTGTTCTCTGGGTTTAGTTTAGGTGTTGCAGTTTCTCTTATTTTTCTCACTCTCTTGTTTTTCTGTTATTCCCTCAGGTCTCCAAAATTTGAAGTCTTTCTTTCAGGGTTTGATAGTGTTGGTCCAAATCTTCCTTTTTCTTCTTGCCCCTTTAATAATAATAACCAATCTTCTTCAGAGTCTAAACCTTCTTCTGTGAGTTTCATTGAAAATGGTAATAATGCAAGTATGCATGCACAGAAAACAAATGTGAACAATGATGTGTCAGTGTCTGATAAAGGAGATTTCTTTGATCCTAATATAGTTTCAGACAAAAGTGGTGTTGAAAATTCATCTAGAATAGCCAAAGATGTTGGATTGCATGATGGCCAAAGAAGGGTGGCTTCAAAATCAAATCTTTCTGGTAAAGGAACACAGAAAACTTCTGAGGGAGACTTATTGAAGAATAACAATGCAGGAAATTCTTCATACAAGGGAAAGCATGGGAGGGATTTGAGTAAGAAAAATAATGTAACTGTTACTCAGAATGATTCCAAAGTGAAGAAAGTGCAAGTTGGTTTATATGAAAAGTGTGACATATTTGATGGTAATTGGGTGAGAGATGATTCAAAACCATACTATCCTTCAGGTTCTTGTCCCTTCATTGATAGGGATTTTGATTGTTACCTTAATGGGAGGCCTGATAGTGAATATGTGAAATGGAAATGGCAGCCAAAAGGGTGCAACATTCCAAGTTTGAATGCAACTGATTTTCTGGAGAGGTTGAGAGGACAGAGGCTGGTTTTTGTGGGGGATTCACTGAACAGGAACATGTGGGAGTCCCTGGTCTGTATCCTGAGGCAAAGTATCAGGAACAAGAAACATGTTTATGAAATTTCCGGAAAATCGCAATTTAAGAAGAAAGGTGTCTATTCTTTTAGATTTGAGGATTACAATAGTTCAGTGGATTTTGTTAATTCACCATTCCTTGTTCAAGAATCAACTTTCGAAAGCAAAAATGGATCATTCGAGACATTAAGATTGGATCTGATAGATCAGACAACTACCAAGTATCAGGATGCTGATATTATAGTCTTCAATACAGGCCATTGGTGGACCCATGAGAAAACATCAAAAGGAGAAGATTATTATCAAGAAGGAAATCATGTATACCCAAGACTCAAGGTTTTGGATGCATATACAAGGGCTTTGACTACTTGGGCAAAATGGGTTGACCGAAAAATTGATGCTAGCCAAACTCAAGTTTTCTTCAGAGGATACTCAATTACACATTTCTGGGGTGGGCAATGGAATTCAGGTGGACAGTGCCACAACGAAACCGAGCCGATATTCAACGAAAGTTACTTACAAAAGTATCCCTCGAAAATGCGGGCAGTCGAGCATGTCATCGAAAACATGAAAACACCAGTGATATATATGAATGTAAGTAGGCTCACAGATTACAGAAAAGATGGCCATCCTTCCTTATACAGAAAGGAATACAAGACAGCGGCAACACACGACTCCGCGGCTTTATACGAAGACTGCAGCCATTGGTGCTTGCCTGGAGTACCAGATACTTGGAATGAATTGCTGTATGTTTCTCTCTTGAAATATGGTAAGAGGACTTGGAAAAGTTGA 1755 0.3858 MLWSDSTREGFGLFRRVLKRTCSMFLAMDMKRLAFSEPFLSHRRKVFSGFSLGVAVSLIFLTLLFFCYSLRSPKFEVFLSGFDSVGPNLPFSSCPFNNNNQSSSESKPSSVSFIENGNNASMHAQKTNVNNDVSVSDKGDFFDPNIVSDKSGVENSSRIAKDVGLHDGQRRVASKSNLSGKGTQKTSEGDLLKNNNAGNSSYKGKHGRDLSKKNNVTVTQNDSKVKKVQVGLYEKCDIFDGNWVRDDSKPYYPSGSCPFIDRDFDCYLNGRPDSEYVKWKWQPKGCNIPSLNATDFLERLRGQRLVFVGDSLNRNMWESLVCILRQSIRNKKHVYEISGKSQFKKKGVYSFRFEDYNSSVDFVNSPFLVQESTFESKNGSFETLRLDLIDQTTTKYQDADIIVFNTGHWWTHEKTSKGEDYYQEGNHVYPRLKVLDAYTRALTTWAKWVDRKIDASQTQVFFRGYSITHFWGGQWNSGGQCHNETEPIFNESYLQKYPSKMRAVEHVIENMKTPVIYMNVSRLTDYRKDGHPSLYRKEYKTAATHDSAALYEDCSHWCLPGVPDTWNELLYVSLLKYGKRTWKS* 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan18g0027 584 Pfam PMR5 N terminal Domain 234 287 IPR025846 -
Lan18g0027 584 MobiDBLite consensus disorder prediction 172 202 - -
Lan18g0027 584 MobiDBLite consensus disorder prediction 153 215 - -
Lan18g0027 584 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 39 581 IPR029962 GO:0016413
Lan18g0027 584 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 39 581 IPR029967 -
Lan18g0027 584 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 288 571 IPR026057 GO:0016740
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan18g0027 Lan-Chr18 199567 203036 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan18g0027 - - gmx:100811395 722.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0588 17 4935067 4939805 Lan18g0027 18 199567 203036 LSH
Lan6g0574 6 5053371 5057497 Lan18g0027 18 199567 203036 PCT
Lan18g0027 18 199567 203036 Lan6g0574 6 5053371 5057497 PCT