Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0588 ATGTTCATGATTTCAATCATGGACTCGAACTTATTTAAGAAATTTATGTTCTCGGAACACTTCATGGCTCATAGAAGAAAAGTGCTTTCTGGGTTCAGCTTTGGTGTTGCTGCTTCCCTTCTTTTTCTTACTCTTCTCTTCCTAAATAGTTATCTCAAGGTTCCTAATGTTCATTTCTTTCTCCATGGATCCACCACTTCCCGTTCTAATTCATCGTTTTCTTCTTGGCCATTTTCCTTTTCTTCTTACCCTTTTTCCTCTTCTTCTGTTACCAATGCTTCTTCTGTGAATGGGGTTGAAGAAAAAGGAAGTGATGTGGGGAAAATAAGTGAAGTGAATGTGTCAAAAAAGGGTTTTGAGAATACCCATTTGGGGAATTTTAGTGTGACTCACGGTAATGCAAGCTTGCATGGTGAACAACAACGTTTCCCAACACAAAATTTATCAGATTCTACTAATGGGGTTGTCAAAAATGTAACCTTGACGGCTGCAAATACAAGTATTTCAGATGAAGTGGTGACACAGAAAAGTATGGAAGGAGTGTTGCATGAAGGAGATTTGGTTAAGAAGAATAGTGTAACTGTCATTGGTCATGACGATGATTCAAAAAAGGAGAAAATGCATGTTGGGTTAAATGGGAAGTGTGATATCTTTGATGGTAATTGGGTAAGAGATGAATCAAAGCCATACTACCCCTTAGGTTCTTGTCCCTACATTGGTAGGGGTTTTGATTGTCACCTTAATGGGAGGCCTGATAGTGAGTATGTCAAATGGAAATGGCAGCCAAATGGGCGTGACATTCCAAGTTTGAATGCAACTGATTTTCTGGAGAGGCTGCGAGGACAGAAGCTGGTTTTTGTGGGGGATTCACTGAACCGGAACATGTGGGTATCCTTGTTGTGTATCCTACGTCAAAGCATCAGGGACAAAAAAAGTATTTTTGATATTTCTGGGAAAATTGAATTTAAGAAGAAAGGTTTCTATGCTTTTAGATTTGAGGATTATAACTGTTCAGTAGATTTTGTTAGTTCACCATTCATTGTTCAAGAGTCAACTTTCAAAGGCATAAATGGGTCATTTGAGACATTAAGATTGGATTTGATGGACCAGACAACTTCCATGTATCACGATGCCGATATCATAGTCTTCAATACAGGCCACTGGTGGGCACACAAGAAAACATCAAAGGGAAAAAACTATTATCAAGAAGGTAACCATCTATACCCAAAACTCAAGGTTTTAAATGCATATACCAAGGCTTTGACCACTTGGGCTAAGTGGATTGACGACAACATTGATGCCAATCGAACTCAGGTTATCTTTCGAGGATACTCAGTTACCCATTTCAGGGGTGGCCAATGGAATTCAGGAGGACAATGCAACAAAGAAACCGAGCCAATATTTAATAGAACTCAGCTAAGGAAATATTCATCCAAAATGAGGGCTTTAGATAATGTCATCTCAAAGATGAAAACTCCAGTGATATATATGAACATAAGTAGGCTTACTGATTACAGAAAAGATGGGCATCCTTCTATATACAGAATGGACTATAAGACAGCAGAAGAACGGGTCGCCGCCGAGTTACACCAAGATTGCAGTCATTGGTGCTTGCCAGGAGTACCAGATACTTGGAATGAACTATTATATGCTTCTCTCTTAAAATATGGAAAAGGCAGTTGGAAAACCTGA 1692 0.3907 MFMISIMDSNLFKKFMFSEHFMAHRRKVLSGFSFGVAASLLFLTLLFLNSYLKVPNVHFFLHGSTTSRSNSSFSSWPFSFSSYPFSSSSVTNASSVNGVEEKGSDVGKISEVNVSKKGFENTHLGNFSVTHGNASLHGEQQRFPTQNLSDSTNGVVKNVTLTAANTSISDEVVTQKSMEGVLHEGDLVKKNSVTVIGHDDDSKKEKMHVGLNGKCDIFDGNWVRDESKPYYPLGSCPYIGRGFDCHLNGRPDSEYVKWKWQPNGRDIPSLNATDFLERLRGQKLVFVGDSLNRNMWVSLLCILRQSIRDKKSIFDISGKIEFKKKGFYAFRFEDYNCSVDFVSSPFIVQESTFKGINGSFETLRLDLMDQTTSMYHDADIIVFNTGHWWAHKKTSKGKNYYQEGNHLYPKLKVLNAYTKALTTWAKWIDDNIDANRTQVIFRGYSVTHFRGGQWNSGGQCNKETEPIFNRTQLRKYSSKMRALDNVISKMKTPVIYMNISRLTDYRKDGHPSIYRMDYKTAEERVAAELHQDCSHWCLPGVPDTWNELLYASLLKYGKGSWKT* 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0588 563 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 19 561 - -
Lan17g0588 563 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 19 561 IPR029962 GO:0016413
Lan17g0588 563 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 267 551 IPR026057 GO:0016740
Lan17g0588 563 Pfam PMR5 N terminal Domain 214 264 IPR025846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0588 Lan-Chr17 4935067 4939805 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0588 - - cam:101513224 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan17g0588 17 4935067 4939805 Lan18g0027 18 199567 203036 LSH
Lan6g0574 6 5053371 5057497 Lan17g0588 17 4935067 4939805 PCT
Lan17g0588 17 4935067 4939805 Lan6g0574 6 5053371 5057497 PCT