Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g1096 ATGATGGAGAAGTCAACAATGGTATTTTTGTATTTGCTTCTTATGGCAACTTTTCAGAAAGCAGTGTCAGATGATCATCAACCCCTCTCAAAAGTTGCAATTCATAAGACAGTATTTGCTATTGATGAACATGCTTATATCAAAGCCACTCCTAATGTCCTTGGCTTGGAGGGACATTATACCGAATGGGTTACACTGCAATATAGTAATAACAAACCAACGATAGATGACTGGATTGGAGTATTTTCTCCTGCAAACTTCAGTGCTTCTACCTGCCCTGGAGAAAACAAAATGACGAGTCCTCCATTTTTGTGTTCTGCACCAATCAAGTTTCAGTATGCAAATTTCTCCAGTCACAGTTACAAAGATACCGGAAAAGGTTCATTGAAGCTTCAGTTGATTAATCAGAGATCAGACTTCTCATTTGCTCTTTTCACGGGTGGCTTAACTAATCCAAAGCTCATTGCAGTGTCAAACAAAGTTTCATTCGTCAATCCAAATGCTCCGGTGTATCCACGATTAGCACAAGGCAAAACATGGAATGAAATTACTGTAACATGGACAAGTGGATATGATATCAGCGACGCTGAGCCTTTTGTTGAATGGGGCCCAAAAGAAGGAAACCTTGTGGAAACTCCTGCCGGGACATTGACTTTTGATCGCAACACAATGTGTGGTGCACCAGCAAGGACTGTTGGATGGCGTGACCCTGGATACATTCACACCAGTTTTCTAAAGGAGTTGTGGCCAAATAGAGAGTACACATACAAGCTGGGTCATAGACTATTTAACGGTACAACAATTTGGAGTAAAAAATATCACTTTAAAGCATCTCCATATCCTGGTCAAAGTTCAGTGCAACGAGTAGTGATATTTGGTGATATGGGAAAGGCAGAAGCTGACGGATCGAATGAATATAACAATTTCCAGCCTGGCTCACTCAACACTACTAAGCAGATTATTCAAGACTTAGAGGACATAGATCTAGTCTTCCACATCGGTGACTTATGCTATGCTAATGGATATATTTCACAGTGGGACCAATTTACGGCACAGATTGAGCCAATTGCATCAACGGTACCCTATATGACAGCAAGTGGCAACCATGAGCGTGACTGGCCAGGAACTGGATCCTTTTATGGGAACTTGGACTCGGGTGGTGAATGTGGTGTACCGGCTCAGACTATGTTCTTTGTTCCTGCTGAGAACCGGGAAAAATTCTGGTACTCTACGGACTATGGCATGTTCAGATTCTGCATAGCTCACACAGAACTTGATTGGAGAAAAGGAACAGAGCAGTATGAATTCATCGAAAAGTGCCTAGCATCGGTTGACAGACAAAAACAGCCATGGCTGATATTTCTTGCACACAGAGTACTTGGTTATTCTTCTGCCGAGTTCTATGTGCAAGAAGGCTCTTTTGAAGAACCAATGGGAAGAGAGGACCTTCAATATCTCTGGCAAAAATATAAGGTGGACATAGCCATGTATGGACATGTCCATAACTATGAAAGAACATGCCCAATATACCAGAATGTGTGCACCAATAAAGAGAAGCACAATTACAAAGGCAACTTGAATGGGACAATACATGTAGTGGTTGGAGGAGGAGGAGCATCCCTTGCTGAATTTGCTCCAATCAACACAACATGGAGTATCTTTAAAGACCATGACTTTGGATTTGTCAAACTTACAGCATTTGATCATTCAAATCTGTTGCTTGAATACAAGAAGAGCAGTGATGGACAAGTTTATGATTCTTTCAGTATATCAAGGGATTATAGAGACATCTTGGCTTGTTCTGTTGATACTTGTCCAAGTACAACACTTGCATCTTGA 1839 0.4133 MMEKSTMVFLYLLLMATFQKAVSDDHQPLSKVAIHKTVFAIDEHAYIKATPNVLGLEGHYTEWVTLQYSNNKPTIDDWIGVFSPANFSASTCPGENKMTSPPFLCSAPIKFQYANFSSHSYKDTGKGSLKLQLINQRSDFSFALFTGGLTNPKLIAVSNKVSFVNPNAPVYPRLAQGKTWNEITVTWTSGYDISDAEPFVEWGPKEGNLVETPAGTLTFDRNTMCGAPARTVGWRDPGYIHTSFLKELWPNREYTYKLGHRLFNGTTIWSKKYHFKASPYPGQSSVQRVVIFGDMGKAEADGSNEYNNFQPGSLNTTKQIIQDLEDIDLVFHIGDLCYANGYISQWDQFTAQIEPIASTVPYMTASGNHERDWPGTGSFYGNLDSGGECGVPAQTMFFVPAENREKFWYSTDYGMFRFCIAHTELDWRKGTEQYEFIEKCLASVDRQKQPWLIFLAHRVLGYSSAEFYVQEGSFEEPMGREDLQYLWQKYKVDIAMYGHVHNYERTCPIYQNVCTNKEKHNYKGNLNGTIHVVVGGGGASLAEFAPINTTWSIFKDHDFGFVKLTAFDHSNLLLEYKKSSDGQVYDSFSISRDYRDILACSVDTCPSTTLAS* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g1096 612 SUPERFAMILY Metallo-dependent phosphatases 287 594 IPR029052 -
Lan17g1096 612 PANTHER PURPLE ACID PHOSPHATASE-RELATED 3 611 - -
Lan17g1096 612 CDD MPP_PAPs 287 592 IPR041792 -
Lan17g1096 612 Pfam Purple acid Phosphatase, N-terminal domain 173 276 IPR015914 GO:0003993|GO:0046872
Lan17g1096 612 Gene3D - 283 596 IPR029052 -
Lan17g1096 612 Pfam Iron/zinc purple acid phosphatase-like protein C 528 587 IPR025733 -
Lan17g1096 612 SUPERFAMILY Purple acid phosphatase, N-terminal domain 146 279 IPR008963 GO:0003993|GO:0046872
Lan17g1096 612 Pfam Calcineurin-like phosphoesterase 288 503 IPR004843 GO:0016787
Lan17g1096 612 Pfam Fn3-like domain from Purple Acid Phosphatase 47 165 IPR040974 -
Lan17g1096 612 Gene3D - 168 281 - -
Lan17g1096 612 PANTHER PURPLE ACID PHOSPHATASE 3 611 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g1096 Lan-Chr17 17894860 17901093 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan17g1096 38 590 Miscellaneous Gene Families AT1G13900 31.588 2.54e-70 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g1096 K22390 - gmx:100817130 1155.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0775 12 14995388 14998165 Lan17g1096 17 17894860 17901093 LSH
Lan1g1470 1 24698459 24703226 Lan17g1096 17 17894860 17901093 LSH