Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan12g0775 ATGACAGTTACATGGACAAGTGGATATAACATAAATGAATCTACACCGCTTGTTAAGTGGGGTCCTAAAGGGAAAAAACTTGTTCAATCTCCTGCTGTGACATTGACATTTGGTCGTTATAGCGTGTGTGGTTCTCCTGCTTCGACTGTTGGTTGGCGTGACCCTGGTTTCATACACACAAGTTTCCTTAAAAATCTGTGGCCAAATTTAATGTATACATACCGATTGGGGCACTTGTTGCCTGATGGTTCATATATTTGGAGCAAGCAATATTCATTCAAGTCATCACCTTATCCTGGACAAAGCTCGCTGCAACGTGTTATCATGTTTGGTGACATGGGGAAGGCCGAGCGTGATGGTTCAAATGAGTTTAGCAACTATCAACCTGGTTCACTTAACACCACTGACCAGCTCATCAAGGATTTAGAAAATATTGACATTGTTTTCCACATTGGAGATATTACATATGCAAATGGATACCTCTCTCAGTGGGACCAATTCACAGCTCAAGTGGAACCAATTGCATCAAAAGTGCCATATATGACTGCCAGTGGTAATCATGAACGTGACTGGCCCAACACAGGATCCTTTTATGACACTACGGATTCAGGTGGGGAATGTGGAGTTTTGGCTCAGACCATGTTTTATGTTCCGGCTGAAAACAGAGCGAAGTTCTGGTAA 681 0.4258 MTVTWTSGYNINESTPLVKWGPKGKKLVQSPAVTLTFGRYSVCGSPASTVGWRDPGFIHTSFLKNLWPNLMYTYRLGHLLPDGSYIWSKQYSFKSSPYPGQSSLQRVIMFGDMGKAERDGSNEFSNYQPGSLNTTDQLIKDLENIDIVFHIGDITYANGYLSQWDQFTAQVEPIASKVPYMTASGNHERDWPNTGSFYDTTDSGGECGVLAQTMFYVPAENRAKFW* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan12g0775 226 PANTHER PURPLE ACID PHOSPHATASE-RELATED 1 226 - -
Lan12g0775 226 Gene3D - 1 99 - -
Lan12g0775 226 PANTHER INACTIVE PURPLE ACID PHOSPHATASE 1-RELATED 1 226 - -
Lan12g0775 226 SUPERFAMILY Metallo-dependent phosphatases 105 192 IPR029052 -
Lan12g0775 226 Gene3D - 101 226 IPR029052 -
Lan12g0775 226 Pfam Purple acid Phosphatase, N-terminal domain 1 94 IPR015914 GO:0003993|GO:0046872
Lan12g0775 226 Pfam Calcineurin-like phosphoesterase 106 194 IPR004843 GO:0016787
Lan12g0775 226 SUPERFAMILY Purple acid phosphatase, N-terminal domain 1 97 IPR008963 GO:0003993|GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan12g0775 Lan-Chr12 14995388 14998165 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan12g0775 39 219 Miscellaneous Gene Families AT2G03450 41.327 1.51e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan12g0775 K22390 - gmx:100814531 431.409
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0775 12 14995388 14998165 Lan1g1470 1 24698459 24703226 LSH
Lan12g0775 12 14995388 14998165 Lan17g1096 17 17894860 17901093 LSH