Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0983 ATGTATTCTACAGATTCTAGTACTAGTGTGAGACCTTGTTACTTGGAAAAGAACCATGGTTTAGCATCCTTAAAAGACATGGATTCTGTTCATTGTGGCAACAACAGTTTTGTGTCCAGGTCTATGATGCCTATGACTATGGGTTATGCTGCAGCTTCCTCTTATGTTTCCTCACCAAGATCTGGAAGAAGATTCTATGATGCTAGATTTGAAGATCACAAACCCCACTTTCTTCAAGCTTGTTTTCTATGCAAGAAGACACTTGGAAACAATAGTGACATCTTCATGTACAGAGGGGACACACCATTTTGTAGTGAAGAGTGCAGGGCAGAACAAATAGATATAGATGAAGCTAAGGAGAAGAAAAAGAAACTTTCTTCATCCATGAAGGTTATGAGGAACAAGGAGCAAAGAAAATCAGGGTCCCCAAACAAGGCCCAAGGTTACTCCTTCCGTACAGGAGCAGTTGCTGCTTAA 477 0.4067 MYSTDSSTSVRPCYLEKNHGLASLKDMDSVHCGNNSFVSRSMMPMTMGYAAASSYVSSPRSGRRFYDARFEDHKPHFLQACFLCKKTLGNNSDIFMYRGDTPFCSEECRAEQIDIDEAKEKKKKLSSSMKVMRNKEQRKSGSPNKAQGYSFRTGAVAA* 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0983 158 Pfam zinc-finger of the FCS-type, C2-C2 68 119 IPR007650 -
Lan17g0983 158 ProSiteProfiles Zinc finger FLZ-type profile. 76 120 IPR007650 -
Lan17g0983 158 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 52 157 - -
Lan17g0983 158 MobiDBLite consensus disorder prediction 119 158 - -
Lan17g0983 158 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 52 157 IPR044533 -
Lan17g0983 158 Coils Coil 108 135 - -
Lan17g0983 158 MobiDBLite consensus disorder prediction 119 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0983 Lan-Chr17 13909122 13910373 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0983 - - aprc:113849917 201.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0937 6 8779530 8781078 Lan17g0983 17 13909122 13910373 LSH
Lan17g0983 17 13909122 13910373 Lan17g0385 17 2876001 2877181 PCT