Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan17g0385 ATGACTAGTTCTTCCAAAAGACATTGCCTCTTAGAAGAGGACAATGGTTTGGCTTTCATTGCTAACACCGAGGGTGGGTTTTCTGGCCACTATCCTTACCATTACCAACATGGTTTTGTGTCTAGGACTTTGGGTTACGCTTACCCAATTTCATCACTTAGATCTGGAAGATTTTATGATGCCAGATTTGAAGATCATATACCCCATTTCCTTCAAGCTTGTTTTCTTTGCAAAAAACCTCTTGGAAATAATAGAGACATCTTCATGTACAGAGGGGACACGCCCTTTTGCAGTGACGATTGTAGGCAAGAACAAATAGAGATGGACGAAGCCAAAGAGAAGAATAAGAACATTTCTTCAATGAAGGCTTTGAGGAAAAAGGAGCAAAACAAATCTGCTTCACCAAACAAGACCCAAGATTACTCCTTTCGTGCAGGGACTGTTGCTGCAGCTTGA 456 0.4123 MTSSSKRHCLLEEDNGLAFIANTEGGFSGHYPYHYQHGFVSRTLGYAYPISSLRSGRFYDARFEDHIPHFLQACFLCKKPLGNNRDIFMYRGDTPFCSDDCRQEQIEMDEAKEKNKNISSMKALRKKEQNKSASPNKTQDYSFRAGTVAAA* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan17g0385 151 ProSiteProfiles Zinc finger FLZ-type profile. 69 113 IPR007650 -
Lan17g0385 151 PANTHER - 47 151 - -
Lan17g0385 151 MobiDBLite consensus disorder prediction 109 133 - -
Lan17g0385 151 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 47 151 IPR044533 -
Lan17g0385 151 Coils Coil 101 131 - -
Lan17g0385 151 MobiDBLite consensus disorder prediction 109 151 - -
Lan17g0385 151 Pfam zinc-finger of the FCS-type, C2-C2 61 112 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan17g0385 Lan-Chr17 2876001 2877181 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan17g0385 - - gmx:100797178 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g0937 6 8779530 8781078 Lan17g0385 17 2876001 2877181 PCT
Lan17g0983 17 13909122 13910373 Lan17g0385 17 2876001 2877181 PCT