Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g1141 ATGGGTTCCACTCCCACACTGAAGAACAACAACACAATGGATCAAGAAAACGGCACCGTTTCATCTCCAATTTCCGCCACCGTATCATCCTCCATAGAGTGGGGCACACCGGAAGCCGTAGAATACGTTCGATCCCTAACCGAAGTTGGCGCCATGACGCGCCTCCTCCACGAGTGTATCGCACACCAACGAGCCTTAGATTTTGAACTCGACGATCTCTTATCTCAGCGTAACGATCTCGATAAACACCTTCTTCATCTTCAACGCTCTTCTGAAGTTCTCAACATTGTTAAATCTGACTCTGATTACATGCTTAACAATGTTTCTTCTACTTGTGATCTCGCTGATGACGTCAGCAGGAAGGTTCGTGAGCTTGATCTAGCGCAGTCGCGCGTGAGATCCACGCTTTTGAGGATTGATGCGATTGTTGAGAGGGGGAATTGTTTGGAAGGTGTGTATAGGGCGCTTGATTCCGAGGATTATGAATCCGCGGCGAGGTATGTGCAGGGTTTTCTTAAGATTGATGCTGAGTACAAGGATTGTGGGAATGATGAGAGGGAGAGGTTGATGAGCGCGAAGAAGCAGCTTGAAGCGATTGTGAGGAAGAAGCTCTCGGTCGCAGTGGATCAGAGAGATCACGGCTCGATTTTGAGGTTTATTCGGCTTTATACACCGCTAGGGTTGGAGGAGGAGGGGTTGCAGGTCTATGTTGGTTATTTGAAGAAAGTAATTGGGATGAGGTCGAGGGTCGAGTTTGAACAATTGGTGGATCTGATTGAACAGAGAAATAATGGAAGCAATGTTAATGTTAATTTTGTTTTGTGTTTGACTAATTTGTTTAAGGATATCGTGTTGGCGATTGAAGAGAATAATGAGATTTTGAGTGGTTTATGTGGTGAGGATGGGATTGTGTATGCGATTTGTGAGCTACAAGAGGAATGTGATTCGCGAGGTTCTGTGATTTTGAAAAAGTATATGGAATATAGGAAGTTAGCTAAGTTGTCATCTGAGATCAATGCACAGAACAGTAATTTATTGGCAGTTGGAGGAGGTGCCGAGGGACCGGATCCGCGAGAGGTTGAGTTGTACTTGGAGGAGATTCTGTCACTTATGCAATTGGGCGAGGATTATACAGAGTTTGCGATTTCGAAGATCAAAGGTCTTACTTCTGTGGACCCCGAGTTGGTCCCTCGTGCGACGAAGGCTTTCAGGAGCGGTAGTTTCAGTAAGGTTGCACAAGATTTAACTGGATTTTATGTGATTCTGGAAGGGTTCTTCATGGTGGAAAATGTTAGGAAAGCTATACGGATTGATGAACAGGTGCCTGATAGCCTTACCACTTCTATGGTGGATGATGTATTCTATGTATTGCAGAGTTGTTTGCGAAGAGCAATATCCACTTCGAATATAAGTTCTGTTATAGCGGTTTTGAGTGGTGCTAGTAGTTTATTGACCAATGAGTATCAGGAAGCCTTACAGCAGAAAATAAGGGAGCCGAACCTTGGTGCAAAGCTGTTCTTTGGTGGTGTTGGCGTGCAGAAAACTGGGACAGAAATTGCAACAGCTTTAAATAATATCGATGTTAGCAGTGAATATGTTCTGAAGCTGAAGTATGAAATTGAAGAACAGTGTGCTGAGGTTTTTCCTGCACCGGCAGATCGAGAGAAGGTAAAATCATGTTTGTCTGAAATGGGAGAAAGCAGCAATGCTTTCAAACAAGCCTTGAATGCTGGCATAGAACAACTTGTGGCAACCATTACACCACGAATACGGCCAGTTTTAGACAGTGTAGGAACAATTAGCTATGAACTTTCAGAGGCCGAGTATGCAGATAATGAGGTGAATGACCCATGGGTTCAAAGACTTCTCCATGCTGTGGAGACAAACGTAGCATGGCTGCAGCCGCTGATGACCGCCAACAACTACGACACTTTTGTTCATTTGGTTATCGACTTCATCGTGAAAAGGCTTGAAGTAATTATGATGCAGAAAAGATTCAGTCAGCTTGGTGGTCTTCAGCTTGACAGAGATACTCGAGCTTTGGTAAGCCATTTTAGCATCATGACTCAGCGAACTGTTCGGGACAAGTTTGCTCGTCTCACTCAAATGGCAACAATTCTAAACTTAGAAAAAGTGTCTGAGATTCTTGATTTCTGGGGAGAAAACTCTGGACCTATGACATGGAGATTAACTCCGGCAGAGGTTAGGCGCGTATTGGGTCTACGAGTTGATTTTAAACCAGAAGCTATAGCTGCTCTAAAGTTGTAA 2268 0.4418 MGSTPTLKNNNTMDQENGTVSSPISATVSSSIEWGTPEAVEYVRSLTEVGAMTRLLHECIAHQRALDFELDDLLSQRNDLDKHLLHLQRSSEVLNIVKSDSDYMLNNVSSTCDLADDVSRKVRELDLAQSRVRSTLLRIDAIVERGNCLEGVYRALDSEDYESAARYVQGFLKIDAEYKDCGNDERERLMSAKKQLEAIVRKKLSVAVDQRDHGSILRFIRLYTPLGLEEEGLQVYVGYLKKVIGMRSRVEFEQLVDLIEQRNNGSNVNVNFVLCLTNLFKDIVLAIEENNEILSGLCGEDGIVYAICELQEECDSRGSVILKKYMEYRKLAKLSSEINAQNSNLLAVGGGAEGPDPREVELYLEEILSLMQLGEDYTEFAISKIKGLTSVDPELVPRATKAFRSGSFSKVAQDLTGFYVILEGFFMVENVRKAIRIDEQVPDSLTTSMVDDVFYVLQSCLRRAISTSNISSVIAVLSGASSLLTNEYQEALQQKIREPNLGAKLFFGGVGVQKTGTEIATALNNIDVSSEYVLKLKYEIEEQCAEVFPAPADREKVKSCLSEMGESSNAFKQALNAGIEQLVATITPRIRPVLDSVGTISYELSEAEYADNEVNDPWVQRLLHAVETNVAWLQPLMTANNYDTFVHLVIDFIVKRLEVIMMQKRFSQLGGLQLDRDTRALVSHFSIMTQRTVRDKFARLTQMATILNLEKVSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALKL* 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g1141 755 MobiDBLite consensus disorder prediction 1 24 - -
Lan16g1141 755 Pfam COG4 transport protein 190 495 IPR013167 -
Lan16g1141 755 Gene3D - 509 586 - -
Lan16g1141 755 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4 37 755 - -
Lan16g1141 755 SMART cog4.2seq4 189 497 IPR013167 -
Lan16g1141 755 Gene3D - 587 755 - -
Lan16g1141 755 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX SUBUNIT 4 37 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g1141 Lan-Chr16 18465491 18469601 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g1141 K20291 - gmx:100778820 1255.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0811 4 10122423 10132183 Lan16g1141 16 18465491 18469601 LSH