Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0198 ATGGCTTGTTGCAGAAGCAAAACTTTAAGCTTAATCTTAGTCACATTTTCGTTAGTAATGTGTGCCTTACTAGGGGTTGGGGAAGGGAGGGTACCCTTTGCATGTGACCCTAATAACGGGTTAACGAAGGGGTTCAAGTTCTGTAGTACACACGTAGCTATAAACTTGAGGGTACAAGACCTCATAGGGAGACTCACATTGCCTGAGAAGATAAGGTTGGTGGTGAACAATGCCATAGAGGTGCCAAGGCTAGGTATACAAGGTTATGAGTGGTGGTCGGAGGCACTTCACGGCGTCTCCAATGTCGGACCCGGGACCAAGTTTGGTGGGGCATTTCCCGGCGCCACCAGCTTCCCTCAGGTTATAACCACCGCTGCTTCCTTCAACCAGTCACTGTGGCAACAAATTGGACAGGTAGTATCCGATGAAGCAAGAGCAATGTATAATGGTGGGGTGGCTGGCTTGACATACTGGAGCCCCAATGTGAACATTTTTCGTGACCCACGGTGGGGCCGTGGCCAAGAAACTCCTGGTGAAGACCCGATATTGGCCGGAAAATACGCCGCAAGCTATGTCAAAGGACTCCAAGGTGACGGAGCCGGTAATCGGCTAAAGGTTGCTGCTTGTTGTAAGCATTATACTGCCTATGACCTTGATAATTGGAATGGTGTAGACAGGTTTCATTTTAATGCCAAGGTAACTAAGCAAGACTTGGAGGACACATATAATGTACCATTCAAATCATGTGTGTTGGAAGGAAAAGTGGCTAGTGTGATGTGTTCCTATAATCAAGTTAATGGCAAACCCACATGTGCTGATTCTAATCTCCTTCGTAACACTATTCGTGGCAAATGGCATCTCAATGGGTACATAGTCTCGGATTGTGACTCAGTTGATACTTTCTTTGGCACCCAACACTATACAAAAACACCTGAAGAGGCAGCAGCAGAAGCTATTAAAGCAGGACTTGATTTAGATTGTGGGCCATTTTTGGCCCTTCACACAGATGGTGCCATTAAGCAAGGGCTCATTACTGAAAATGATCTTAACCTTGCATTAGGAAACCTTATTACAGTGCAAATGAGATTGGGCATGTTTGATGGTGGAGCCCAACCATATGGAAACTTGGGTCCAAAAGATGTGTGTACTCAGGCCCATCAAGAATTGGCCCTTGAAGCAGCTAGACAAGGCATAGTTCTGTTGCAAAACAATGGAAACACCTTGCCACTATCCCCTAGGACTCAAGGCATTGTTGGAGTCATTGGACCTAATTCAGATGTCACTGTTACAATGATTGGAAACTATGCAGGTGTGGCATGTGGTTATACTAGTCCATTACAAGGGATTGCAAGATATGTTAAGACCATGCATCAAGTAGGGTGTAGGGATGTTGCATGTGGTGCAACTGATCTATTTGGAAGAGCAGAAACTGTAGCTAGACAAGTTGATGCAACAGTGTTAGTGGTTGGGCTTGACCAATCCATAGAAGCAGAGTTCAAAGATAGAGTTGGGCTTCTCTTACCAGGTCACCAACAAGACCTTGTGTCTAGGGTTGCTAAGGCTGCTAAAGGCCCAGTTATCTTGGTCATTATGTCTGGTGGCCCTGTTGATGTCACTTTTGCCAAAAATGATCCTAAGATTAGTGCCATTTTATGGGTTGGTTATCCTGGTCAAGCTGGAGGAACTGCCATAGCTGATGTCATTTTTGGTACAACTAACCCAGGAGGAAGGCTACCTAATACATGGTACCCACAAGACTATGTAGACAATGTGCCCATGACAAACATGGACATGCGTGCAAACCCAACATCAGGGTACCCAGGAAGGACCTATAGATTCTACAAAGGCCCTGTGGTATTCCCATTTGGTCATGGCTTGAGTTACACAACATTCACACACTCCTTAGTAGTTGCTCCTAAAGAGGTAGCACTCCCAATTGTAAGCCTAAGTGCCTTAAAAAACTCAACATTTTCAAGCAAAGGAGTGAAAGTTAGCCATGCAAATTGTGGTGCATTGGAGTTGGGATTCCATGTTGATGTGAAAAATGAAGGGTCAATGGATGGGAGTGAAACACTTCTCATTTTCTCAAAGCCACCAATTGGGAAATGGAATTCAGTTAAACAATTGGTGAGCTTCCATAAAGTACATGTACATGTTGGTTCAAAGCAAAGTGTTAAATTTGGTGTTCATGTGTGTAAGCACCTTTCTATTGTGGATGAGTTTGGGATTCGAAGAATTCCAATGGGTGAACATGAACTTCATATTGGTGATGTTAAACATTCAATTTATGTCCAAACTCTTGATGAAATCAAGAATTAG 2319 0.4411 MACCRSKTLSLILVTFSLVMCALLGVGEGRVPFACDPNNGLTKGFKFCSTHVAINLRVQDLIGRLTLPEKIRLVVNNAIEVPRLGIQGYEWWSEALHGVSNVGPGTKFGGAFPGATSFPQVITTAASFNQSLWQQIGQVVSDEARAMYNGGVAGLTYWSPNVNIFRDPRWGRGQETPGEDPILAGKYAASYVKGLQGDGAGNRLKVAACCKHYTAYDLDNWNGVDRFHFNAKVTKQDLEDTYNVPFKSCVLEGKVASVMCSYNQVNGKPTCADSNLLRNTIRGKWHLNGYIVSDCDSVDTFFGTQHYTKTPEEAAAEAIKAGLDLDCGPFLALHTDGAIKQGLITENDLNLALGNLITVQMRLGMFDGGAQPYGNLGPKDVCTQAHQELALEAARQGIVLLQNNGNTLPLSPRTQGIVGVIGPNSDVTVTMIGNYAGVACGYTSPLQGIARYVKTMHQVGCRDVACGATDLFGRAETVARQVDATVLVVGLDQSIEAEFKDRVGLLLPGHQQDLVSRVAKAAKGPVILVIMSGGPVDVTFAKNDPKISAILWVGYPGQAGGTAIADVIFGTTNPGGRLPNTWYPQDYVDNVPMTNMDMRANPTSGYPGRTYRFYKGPVVFPFGHGLSYTTFTHSLVVAPKEVALPIVSLSALKNSTFSSKGVKVSHANCGALELGFHVDVKNEGSMDGSETLLIFSKPPIGKWNSVKQLVSFHKVHVHVGSKQSVKFGVHVCKHLSIVDEFGIRRIPMGEHELHIGDVKHSIYVQTLDEIKN* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0198 772 Gene3D - 57 373 IPR036962 GO:0004553|GO:0005975
Lan16g0198 772 PANTHER BETA-D-XYLOSIDASE 1 11 766 - -
Lan16g0198 772 SMART Fn3_like_2 690 759 IPR026891 -
Lan16g0198 772 Pfam Glycosyl hydrolase family 3 N terminal domain 112 346 IPR001764 GO:0004553|GO:0005975
Lan16g0198 772 SUPERFAMILY (Trans)glycosidases 46 397 IPR017853 -
Lan16g0198 772 Pfam Glycosyl hydrolase family 3 C-terminal domain 398 628 IPR002772 GO:0004553|GO:0005975
Lan16g0198 772 Gene3D Immunoglobulins 652 770 IPR013783 -
Lan16g0198 772 Pfam Fibronectin type III-like domain 697 757 IPR026891 -
Lan16g0198 772 Gene3D - 383 630 IPR036881 GO:0004553|GO:0005975
Lan16g0198 772 PRINTS Glycosyl hydrolase family 3 signature 118 137 IPR001764 GO:0004553|GO:0005975
Lan16g0198 772 PRINTS Glycosyl hydrolase family 3 signature 206 222 IPR001764 GO:0004553|GO:0005975
Lan16g0198 772 PRINTS Glycosyl hydrolase family 3 signature 280 298 IPR001764 GO:0004553|GO:0005975
Lan16g0198 772 PANTHER SUGAR HYDROLASE-RELATED 11 766 IPR044993 GO:0009044|GO:0045493
Lan16g0198 772 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 398 631 IPR036881 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0198 Lan-Chr16 1547306 1553561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan16g0198 4 765 Glycoside Hydrolase AT5G49360 71.281 0.0 1137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0198 - - gmx:100805839 1304.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan16g0198 16 1547306 1553561 Lan19g0577 19 10520879 10538321 LSH