Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan16g0187 ATGGTTGTCCTAACATTCAGTGATGAGTCCACTAGCATTGTCCAAACAAGGAGATTGTTTAAGGCTTTGATCCTTGATGCTCATAACCTCATCCCTAAGCTTCTTCCTCAGGCTATAAAGAAAGTTGAAGTGGTTGAAGGCAATGGAGGACCTGGAACCATTCAAGAGATAACCATTGCTGAAGGTGATAACATAAAACACTTGAAGCATAGAATTGATGCAATAGACAAAGAGAATTTGGCATATAGCTACACAGTAATTGAAGGGGATAGTGTATTGGAAAAGGTAGATTCAATTTCACATGAGATAAAGTTTGAGCCTAATGCAGAGGGAGGTAGCAAGACCAAGAATGTTAGTAAGTATCATCCCAAAGAAGGAGTTGAGATCAAAGAAGAAGATTTCAAGAATGCTAGAGAAGAAGCCTCAACTATCCTCAAGGTATCTTATGATGCACCCTATTATCATATTATATCATTATGTACTTTCAGTTTAGCCTATAGTTTGATTTGA 510 0.3745 MVVLTFSDESTSIVQTRRLFKALILDAHNLIPKLLPQAIKKVEVVEGNGGPGTIQEITIAEGDNIKHLKHRIDAIDKENLAYSYTVIEGDSVLEKVDSISHEIKFEPNAEGGSKTKNVSKYHPKEGVEIKEEDFKNAREEASTILKVSYDAPYYHIISLCTFSLAYSLI* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan16g0187 169 CDD Bet_v1-like 5 146 - -
Lan16g0187 169 PANTHER PR-10 TYPE PATHOGENESIS-RELATED PROTEIN-RELATED 1 147 - -
Lan16g0187 169 PANTHER - 1 147 - -
Lan16g0187 169 PRINTS Major pollen allergen Bet V1 signature 3 23 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan16g0187 169 PRINTS Major pollen allergen Bet V1 signature 26 36 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan16g0187 169 PRINTS Major pollen allergen Bet V1 signature 50 59 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan16g0187 169 PRINTS Major pollen allergen Bet V1 signature 66 85 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan16g0187 169 PRINTS Major pollen allergen Bet V1 signature 85 98 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan16g0187 169 PRINTS Major pollen allergen Bet V1 signature 110 126 IPR024949 GO:0004864|GO:0009738|GO:0010427|GO:0038023
Lan16g0187 169 Gene3D - 2 151 IPR023393 -
Lan16g0187 169 Pfam Pathogenesis-related protein Bet v 1 family 1 126 IPR000916 GO:0006952
Lan16g0187 169 SUPERFAMILY Bet v1-like 5 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan16g0187 Lan-Chr16 1471506 1472823 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan16g0187 - - lang:109329964 333.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan12g0880 12 15860787 15861892 Lan16g0187 16 1471506 1472823 PCT