Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g1085 ATGGGTATTGAAAAAGCACTTAGGGCCATCATTGTAATATTGTTTACATTGTTTGGAGAAAATTTGATGCTTGTTAATGGTGATTTCAATTATAAGGATGCTCTCACCAAATCCATTATTTTCCTAGAGGCACAACGATCAGGGAAACTCCCTTCCAATAATAGGGTTCCTTGGAGAGGAGACTCAGCACTTGATGATGGAAAACTTGCTAATGTGGACCTTTCTGGAGGATACTATGATGCAGGAGATAATGTAAAGTTTGGTCTCCCTATGGCATTCACTGTTACAACTCTATCATGGGCTGCACTTTTTTACAAACAAGAATTACAAGCTACAAAGGAATTGGGACATGTTCAAGATGCTATCAAATGGGGTACTGATTATTTTCTCAAATGCAGCAAACATAAAAAATTATATGTGGAGGTAGGGGACCCACATGAGGATCATAAATGTTGGGTTCGACCAGAAAAGATGAAAACAAAAAGAACAGTTTTGATGATTGACAATAACACTCCCGGGACTGAGATTGCAGCTGAAACTGCAGCAGCAATGGCTGCTGCTTCTATTGTCTTTAGGCCCATTGATCGCAAGTATGCACGTCGTCTCCTCAATAGAGCCAAACTGCTTTTTCAATTTGCAAAATCACATAAAGGAACCTATGATGGAGAGTGTCCCTTCTATTGCTCTTACTCGGGCTATAATGACGAACTTATGTGGGCAGCAACATGGCTATACTATGCTACCCTAAAGCCAATGTATATGAAGTACATTCAGGAAGATGTAATAAGTGCTAGTGTAGCAGAATTTAGTTGGGACCTTAAATATGCTGGAGCTCAAATCCTTCTAACCCAGTTACACTTTCAAGGACACAAAGATCTGGAAGAATTCAAAATCCATGGTGATAGTTTCATATGCTCAGTCCTTCCTGACAGTCCCTACAATCAGATTAAATTGTCTTCTGGTGGCTTGCTTCATGTAAGAGATGGAGCTAACATGCAATATGTGACCGGCACAAGTTTCTTATTCAGTGTATATAGTGATTTGCTTGCTAAACATAAACAGAAAATTACTTGTGGAGAGAAACAATTCAGCTCATCCCACCTCTTTGATTTTGCTAAGAAACAAATGGATTATGTGCTAGGGAAAAACCCTGAAGGTAGATCCTACATGGTAGGATTTGGCAAAAACCCACCAAAACAAGCTCACCATAGAGGTGCTTCTGTGCCAAAGGCATCAAAGGACGAAGTTGTAAGTTGTGCCATGAGCTTCACCAAATGGTTAAATGTAGATTCACCTAACCCTAATGAACTCACTGGTGCAATTATGGGTGGACCTGACAAAAATGACAAGTTTGTTGATAAACGTACGGCTTCATCATATACTGAACCATGCACTTACGTTAATTCTCTAGCAGTTGGACCTCTAGCAAAGCTTGCATCATTGGGTTAA 1449 0.3982 MGIEKALRAIIVILFTLFGENLMLVNGDFNYKDALTKSIIFLEAQRSGKLPSNNRVPWRGDSALDDGKLANVDLSGGYYDAGDNVKFGLPMAFTVTTLSWAALFYKQELQATKELGHVQDAIKWGTDYFLKCSKHKKLYVEVGDPHEDHKCWVRPEKMKTKRTVLMIDNNTPGTEIAAETAAAMAAASIVFRPIDRKYARRLLNRAKLLFQFAKSHKGTYDGECPFYCSYSGYNDELMWAATWLYYATLKPMYMKYIQEDVISASVAEFSWDLKYAGAQILLTQLHFQGHKDLEEFKIHGDSFICSVLPDSPYNQIKLSSGGLLHVRDGANMQYVTGTSFLFSVYSDLLAKHKQKITCGEKQFSSSHLFDFAKKQMDYVLGKNPEGRSYMVGFGKNPPKQAHHRGASVPKASKDEVVSCAMSFTKWLNVDSPNPNELTGAIMGGPDKNDKFVDKRTASSYTEPCTYVNSLAVGPLAKLASLG* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g1085 482 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 378 404 IPR018221 -
Lan15g1085 482 SUPERFAMILY Six-hairpin glycosidases 27 480 IPR008928 GO:0005975
Lan15g1085 482 PANTHER ENDO-1,4-BETA-GLUCANASE 13 479 - -
Lan15g1085 482 Gene3D - 25 482 IPR012341 GO:0005975
Lan15g1085 482 Pfam Glycosyl hydrolase family 9 31 473 IPR001701 GO:0004553|GO:0005975
Lan15g1085 482 PANTHER ENDOGLUCANASE 16-RELATED 13 479 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g1085 Lan-Chr15 19828994 19831858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g1085 7 480 Glycoside Hydrolase AT3G43860 68.697 0.0 683
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g1085 K01179 - gmx:100811509 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g1085 15 19828994 19831858 Lan3g1130 3 23644217 23648041 LSH