Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0993 ATGAGTAGACCGACAACACGGAGTAAAAATAAAAGACAGAGACAAGGGGATGATGGTGCCGGGACTTCAGAAATATGGAGGAAAATTAATGAAACGGGTGTGGTTACTGAAGATGATATGAATCAATTGTATATGATCTGGAAGCCAATTTGTTCAGGCTGCCGTGTTAATACCAAAGATAACCCTAATTGCTTTTGTGCATTGATTCCACCTCAAAATGGAGCCCGGAAGTCTGGCTTATGGCAGAAGATTACAGATTTTGTTGAAAGTCTTGGCCCTGACCCAAGCACAGAACTTCGTGCTTCTGCCAGTTATCCAGCTGGTCTGACAAATCTTGGTGCAACTTGCTATGCAAACAGTATACTCCAGTGCTTGTACATGAATAGATCTTTCCGAGAAGGCATATTTTCTGTAGAACCAGATGTTTTACAACAACAGCCAGTGTTAGATCAACTGGCTAGACTTTTTGCACAGTTGCATGTTAGTAAAAGGGCTTTCATAGATTCTCTTCCATTTATAAAAACACTGGAGTTAGATAATGGAGTTCAGCAGGATTCGCACGAGTTCTTGACATTGCTCCTGTCATTACTTGAGCGTTATTTGAGCCATTCCAAAGTTTCCAAGGCCAGAACAATAGTTCAAGATCTTTTCCGGGGAAGTGTCTCTCATGTGACAACGTGCTCACAATGTGGAAAGGATTCTGAAGCTTCTTCCAAAATGGAGGATTTCTATGAGTTGGAGTTGAATATCAAGGGATTGAAAAGCTTAGATGACAGTCTAAATGATTACCTCTCTGTTGAAAAGCTCCATGGAGACAATCAGTATTTTTGTGAGTCGTGTAAAACAAGAGTCGATGCCACTCGCAGCATCAAGCTCCGTACATTACCTGTTGTACTTAATTTTCAACTGAAACGCTGTGTCTTCCTTCCAAAGACTACAACGAAGAAGAAAATCACTTCTTCATTTTCATTTCCTGCTGAACTGGACATGCAGCATAGACTGTCTGAGTTGTCTCAGTTTGATTTGGTATATGACTTGTCAGCTGTACTGATTCACAAGGGAACTGGTGTTAATAGTGGCCATTACATTGCTCACATTAAAGATGAAAATACTGGGCAGTGGTGGGAGTTTGATGACGAACAGGTCACTGATTTGGGTCGTCATCCGTTTGGTGAAGGATCTTCAAGTTCTACTACTAAATCTGTTATGACTGATGCAGCTTATTCTGAAGCGAAGTTTTCTGACAGCAATGGAAATGGTTTAGATGCCACTCAATTGTCATCTTCCCTTGTGGAGACGTTTTCATCTAGTGATGCATATATGTTGATGTACCATCTTAAACATACAAAAGGTGTTGGTGAAAATGGCGTTGATAAAGTTTCTGGTGCTAACCATAAAGAAAAAAAGGATGTTGCAGTTGCTGCAAAATATAGTTCTCTTCCTTCTCATCTTGATGAAGAGATTCAAAATTTCAATGCCTCATATGTTGATTCATGTGAGAAGTACAATCGTAAGAAAGAGATAGAACTGAGTCGTATTAATGATAGGAAACAAGAAGTTCGATCTGTTTTAGCTGAAGCTGCTGTTTCATCATTGGAGCGACCATTTTATTGGATTTCTAGTGACTGGCTTCGCCAGTGGGCTGACAATGTTACTCCAACTTCTCTTGACAACACATCTATCCAATGTTCACATGGCAAAGTCCCAGTTTCAAAGGTCACCTCAATGAAACGGTTGTCTGCTAAAGCATGGGATAAGTTGTTTCCTAAGTATGGTGAGGGGCCAGCACTGTCACATGATGATCACTGTTTGGATTGTCTGATTCACGGGGCTCATACAGTGGTGTCAGCGGACACCTATCGGGGTAGAAGAGAATCAATGAAGTTACTTGCACGGGATATTCTAGATGGAAACTGCATAGACGACGGAAAGTATTACATATCCAGACTATGGTTGCAGCAGTGGTTGAAAAGAAAAGTCCTTGATGCTCCAACTGAAGCTGATGCTGGACCAACAACAGTCATTAGTTGTCTGCATGGGCAACTGAAGCCCGAGCAAGCTGCTGGTGCTAAGCGTGTGCTTATTCCCGAGAGTTTTTGGCTCTTCTTATATGAAGACGCTGTTTCTGTAAAACCAGATGATCCTTTTGGTGGCCTGACTTTTCCTTCAGACTCCCAAGAGTGTTCCCAATGCAGTAGTGAATTATCTGAAGTAGCATCCTTGGAGGACTCCTTGAGATTAGTTAAACAAAAGCAGCGTCAGAATCATGAAAAATTACTCCTGACTAAAAGTATGCCACTCTCTGTGCATTGCAAGTATTTTTTGGTGCCTTCTTCATGGGTATCAAAATGGAGAAACTATGTTAGTCCAACCCTGAAGAGTTCAGATAAACCTGAAACTTTAGATGGGGTAATTGATTCAGTGATATGTGAAAAGCACTCGCAACTTGTTGAAAGACCTCCTGAACTTGTTTTCAGACGTGGTGCTGTAGTCCAGAGAGAGTCTTCTGTAGCAGGTGGTTTGACCATCATATCTGAGAATGATTGGAAATGTTTCTGTGAAGAATGGGGTGGTGTTAAGACTAAAGGAATTTCTGCAACACTTGAAATTATTAATGGTTCAGAGAATGTTTTGACCGGATCCAATGAAGAGATGCAGATATGTGACAATCAGTTGGGCACTGGGGATAAAGTGAATAATGAAAGTGGGACTGGACAAATTTTGATTAAGACTTTTCCAGAGGTTTGCAGAAGCTGTATTGGAGAAAGAGAAAGCTGTGAGTTAATGCAGAAACTTAATTATTGCAATGAGAACATAAGTGTAATTCTTGTTCGTGGTAAGGAGGTACCTAGGTCAATCTTGGAGGCTTCGAAGGGATCTGCTGAAGCAGATCGGCGGGTTTCAAAGCGTTCCAAGAAAACTAAAAATGGGAGTTCAATTAGTCTTAAAGTTTCTGCTTCAACGACTTTATACCAGCTGAAAATGATGATATGGGAATCCTTTGGGGTTATCAGAGAAAATCAAATACTACAGAAAGGTGATAAGACAATTGAGATTGATGATGAATATACTACCCTTGCGGATGTTAACATTTTTGCTGGAGATCAGATAATAGTAAGGGATTCTGAGATTCATGAAAATCGAGATATTGCTGATGAGCTCTACGATGAGAAAATGGATGTGCAGCATACTGAGGAAGGGTTTCGTGGTACACTTTTGACAGCAAATGTTTCATCCCAGGTTGTTTAA 3249 0.4069 MSRPTTRSKNKRQRQGDDGAGTSEIWRKINETGVVTEDDMNQLYMIWKPICSGCRVNTKDNPNCFCALIPPQNGARKSGLWQKITDFVESLGPDPSTELRASASYPAGLTNLGATCYANSILQCLYMNRSFREGIFSVEPDVLQQQPVLDQLARLFAQLHVSKRAFIDSLPFIKTLELDNGVQQDSHEFLTLLLSLLERYLSHSKVSKARTIVQDLFRGSVSHVTTCSQCGKDSEASSKMEDFYELELNIKGLKSLDDSLNDYLSVEKLHGDNQYFCESCKTRVDATRSIKLRTLPVVLNFQLKRCVFLPKTTTKKKITSSFSFPAELDMQHRLSELSQFDLVYDLSAVLIHKGTGVNSGHYIAHIKDENTGQWWEFDDEQVTDLGRHPFGEGSSSSTTKSVMTDAAYSEAKFSDSNGNGLDATQLSSSLVETFSSSDAYMLMYHLKHTKGVGENGVDKVSGANHKEKKDVAVAAKYSSLPSHLDEEIQNFNASYVDSCEKYNRKKEIELSRINDRKQEVRSVLAEAAVSSLERPFYWISSDWLRQWADNVTPTSLDNTSIQCSHGKVPVSKVTSMKRLSAKAWDKLFPKYGEGPALSHDDHCLDCLIHGAHTVVSADTYRGRRESMKLLARDILDGNCIDDGKYYISRLWLQQWLKRKVLDAPTEADAGPTTVISCLHGQLKPEQAAGAKRVLIPESFWLFLYEDAVSVKPDDPFGGLTFPSDSQECSQCSSELSEVASLEDSLRLVKQKQRQNHEKLLLTKSMPLSVHCKYFLVPSSWVSKWRNYVSPTLKSSDKPETLDGVIDSVICEKHSQLVERPPELVFRRGAVVQRESSVAGGLTIISENDWKCFCEEWGGVKTKGISATLEIINGSENVLTGSNEEMQICDNQLGTGDKVNNESGTGQILIKTFPEVCRSCIGERESCELMQKLNYCNENISVILVRGKEVPRSILEASKGSAEADRRVSKRSKKTKNGSSISLKVSASTTLYQLKMMIWESFGVIRENQILQKGDKTIEIDDEYTTLADVNIFAGDQIIVRDSEIHENRDIADELYDEKMDVQHTEEGFRGTLLTANVSSQVV* 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0993 1082 CDD Ubl_USP48 976 1073 IPR044743 GO:0004197|GO:0004843|GO:0016579
Lan15g0993 1082 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 447 IPR028889 -
Lan15g0993 1082 MobiDBLite consensus disorder prediction 1 25 - -
Lan15g0993 1082 ProSiteProfiles DUSP domain profile. 511 603 IPR006615 GO:0004843
Lan15g0993 1082 ProSiteProfiles DUSP domain profile. 618 726 IPR006615 GO:0004843
Lan15g0993 1082 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1052 - -
Lan15g0993 1082 Gene3D - 743 864 IPR035927 -
Lan15g0993 1082 Gene3D Cysteine proteinases 94 447 - -
Lan15g0993 1082 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Lan15g0993 1082 ProSiteProfiles DUSP domain profile. 747 868 IPR006615 GO:0004843
Lan15g0993 1082 SUPERFAMILY Ubiquitin-like 975 1041 IPR029071 -
Lan15g0993 1082 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1052 - -
Lan15g0993 1082 SMART dusp 529 605 IPR006615 GO:0004843
Lan15g0993 1082 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 108 123 IPR018200 GO:0004843|GO:0006511
Lan15g0993 1082 Pfam Ubiquitin carboxyl-terminal hydrolase 108 444 IPR001394 GO:0004843|GO:0016579
Lan15g0993 1082 SUPERFAMILY Cysteine proteinases 105 444 IPR038765 -
Lan15g0993 1082 SUPERFAMILY DUSP-like 532 603 IPR035927 -
Lan15g0993 1082 Gene3D - 971 1042 - -
Lan15g0993 1082 CDD Peptidase_C19L 108 444 IPR033841 GO:0004843
Lan15g0993 1082 ProSiteProfiles Ubiquitin domain profile. 973 1039 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0993 Lan-Chr15 19142475 19150623 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0993 106 382 Miscellaneous Gene Families AT4G31670 30.201 8.39e-26 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0993 - K11858 gmx:100815770 1773.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0981 10 14842501 14855050 Lan15g0993 15 19142475 19150623 PCT
Lan15g0993 15 19142475 19150623 Lan10g0981 10 14842501 14855050 PCT