Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0981 ATGAGTAGGCCATCAACACGAAGTAAAAACAAAAGGCAGAGACAGGGGGATGATGGTGCTAGCAATTCTGAAATATGGAGGAAAATTCATCAAACTGGTGCAGTGACTGAAGATGATATGAATAAATTGTATATGATTTGGAAGCCGGTCTGTTCAGGCTGTCGTGTCAATACCAAAGACAACCCGAATTGCTTCTGTGCATTGGTTCCACCTCCAAATGGAACCCGGAAGTCTGGCCTATGGATCAAGATGTCAGATTTTATTGAAAGTCTTGGTCCTGACCCAACCAAGGATCTCCGTGCTTCTGCTAGTTCACCTGCAGGCCTGACAAATCTTGGTGCAACATGCTATGCCAACAGTATACTCCAGTGTTTGTACATGAATAAAACTTTCCGAGAAGGCATATTTTCTGTAGAACAAGATGTTTTACAACAACAACCTGTGTTAGATCATCTGGCTCGGCTTTTTGTACAGTTGCACATCAGTAAAATGTCTTTCATAGATTCTTCTCCATTTGTGAAAACACTGGAGTTAGACAATGGGGTTCAGCAAGACAGTCACGAGTTCCTGACGTTGCTTCTGTCATTGCTTGAGCATTGCCTGAGCCATTCCAAAATTGCAAAGGCTAGAACGATAGTTCAAGATCTTTTCCGGGGAAGTGTGTCTCACTTGACAACGTGTTCACAATGTGGAAGAGACTCTGAAGCTTCTTCCAAAAAAGAAGACTTCTGTGAGTTGGAGTTGAATGTCAAGGGGTTGAAAAGTTTAGATGAGAGCCTAGATGATTATCTAAGTGTTGAAGAGCTTCATGGAGACAATCAATATTTTTGTCAGTCATGTAAAACAAGAGTTGATGCTACCCGCAGCATCAAACTGTGTACATTACCTGATGTGCTTAATTTTCATCTTAAGCGTTATGTCTTCCTTCCAAAGACTACAACAAAGAAGAAAATTAGTTCTGCGTTTTCATTTCCTTCTGAACTTGATATGCGTCATAGATTGTCTGAGCTGTCTCAGTTTGAATTGCTATATGATTTGTCAGCTGTACTGATTCACAAGGGAAGTGCTGCTAATAGTGGTCATTACATTGCTCACATCAAGGATGAAAACACTGGGCAATGGTGGGAATTTGATGACGAACATGTCACTAACTTGGGTTGTCATCCATTTGGGGAAGGAGCTTCTACATCTAAATCTGTTAAGTCTGATGTAGCTCATTCTAATTGCTCAGAAGCGAGGATAGCTGACAGTAACGGAAATGGTTTATATGCCTCTCATTCACAATCTTCGCACTTGGAGACATTTTCATCTAGTGAGGCATACATGTTGATGTACCATCTTAAACATATCAAAAATGTTGGTAAAACAGGGAGCATGATTTGTGGTGCAAACCATAAAGGAGATGTTGATGCAGTTACTGTACAAGCAAATGCTCATCTTCCTTCTAATCTTTGTGAAGAAATTGAAAATTTCAATGCATCGTATCTTGATGCTTGTAAGAAGTACAGTGATAAGAAAGAGACAGAATTGAATTGTATCAATGAGAGGAGGCAGGAGGTTCGATCTGTTCTAGCTGAAGCTCCTGTTAAACCACTGGAGCAACCGTTTTTTTGGATTTACAGTGACTGGCTTCGCCAGTGGGCTGACAACATAGTTCCAACTGCTCTTGACAACACATCTATCCAATGTTCACATGGGAAAGTCCCAGTATCAAAGGTTACCTCAATGAAGCGATTGTCTTCTAAAGCATGGGATAAGTTATTCTCCAAGTATGGCGGGGGCCCAAAATTGTCTCATGATGACCACTGTTGGGATTGTCTGATTGATGGGGCCCAGAATGTTGTGTCAGCTGACACCTATCGGGGTCAAAGAGAATCACTGAAGCAACTTGCACGGGATATACTTGATGGAAACTGTCAAGATGGAAAGTACTATGTATCCAGACAATGGTTGCTGCAATGGTGGAAAAGAAAAGTCCTCGATGCTCCATCTGAAGCTGATGCTGGACCAACAACAGCCATTAGTTGTCCACACGGGCAACTTATGCCTGAGCAAGCTGCTGGTGCTAAGCGGGTCCTTGTTCCTGAGGGTTTCTGGTCCTTCTTATATGAAGATGCCATTTCTGTACAACTTGATGATCCTTTGGATTGCCCTACTTTTCCTTTAGACTCCAGAGAATGTTCCCAATGCTGTAATGAGTTATCTGAAGTGACTTGTTTGGAGGACTCTTTGAGATTGGTGAAACAAAGGCATCGCCAGAATCATGAGAAACTATTCCTGGGGAAAAGTATGCCACTCTCTCTGCATTGCAAGTATTTCTTAGTTCCTTCTTCGTGGATTTCAAAATGGAGAAATTACATAAATCCAACTGTCAAGAATTCAGATAAACCTGAAACTTTAGATGCAGTAATTGATTCATTGATGTGTGAAAAGCACTCACAACTCGTAGAAAGGCCTCCTGAACTGGTTTTCAGACGCAATACTATATCCACAAGAGAGTCTGCTGCAGGTGGCTTAACCATCATCTTTGAGAATGATTGGAAATTACTCTGTGAAGAATGGGGTGGTACTGAGACCAAAGGAATATCTGCAATAATTGTTGATATTAATGAATCGGAGAATTCTTTGGCTGGATCCTGCAAAGAGATGCCAATATGTGAGGATCAATTGGATAATGGAAGTGGGAATGGACAAGTTGTGATTAAGACTTTCCCAGAGGTTTGTGAAAGTTGCATTGGAGAAAGAGAAAGCTGCGAGCTAATGCGGAAACTAAATTATTGCAACGAGGAGATATCCATAATTCTGGTTCATGGAAAGGAGGTCCCTAAATCCATCTTGGAGGCTTCAAAGGGATTTGTTGAAACAGATCGTCGGGTTTCCAAACGTGCTCGGAAGATTAAGAACGGTAGTTCAACTAGTCTTAAAGTTTCCGCTTCAACAACAATTTACCAGCTGAAAATGATGATATGGGAATCCGTCGGGGTTGTGAAGGAAAATCAGATACTGCAAAAAGGTGATAGAACAATTGATATTGATAATGAAAGTGCTACACTTGTGGATGTAAACATATTTGCTGGAGATCAGATTATAGTGAGGGATTCTGAGATCCATGAAAATAGAGATATTGCTGATGAACTTTTTGATGAAAAAATGGATACACAGCATACAGAGGAAGGTTTTCGTGGAACACTTTTGACATCAAATATTTCATCTCAAGTTGTTTAG 3225 0.4084 MSRPSTRSKNKRQRQGDDGASNSEIWRKIHQTGAVTEDDMNKLYMIWKPVCSGCRVNTKDNPNCFCALVPPPNGTRKSGLWIKMSDFIESLGPDPTKDLRASASSPAGLTNLGATCYANSILQCLYMNKTFREGIFSVEQDVLQQQPVLDHLARLFVQLHISKMSFIDSSPFVKTLELDNGVQQDSHEFLTLLLSLLEHCLSHSKIAKARTIVQDLFRGSVSHLTTCSQCGRDSEASSKKEDFCELELNVKGLKSLDESLDDYLSVEELHGDNQYFCQSCKTRVDATRSIKLCTLPDVLNFHLKRYVFLPKTTTKKKISSAFSFPSELDMRHRLSELSQFELLYDLSAVLIHKGSAANSGHYIAHIKDENTGQWWEFDDEHVTNLGCHPFGEGASTSKSVKSDVAHSNCSEARIADSNGNGLYASHSQSSHLETFSSSEAYMLMYHLKHIKNVGKTGSMICGANHKGDVDAVTVQANAHLPSNLCEEIENFNASYLDACKKYSDKKETELNCINERRQEVRSVLAEAPVKPLEQPFFWIYSDWLRQWADNIVPTALDNTSIQCSHGKVPVSKVTSMKRLSSKAWDKLFSKYGGGPKLSHDDHCWDCLIDGAQNVVSADTYRGQRESLKQLARDILDGNCQDGKYYVSRQWLLQWWKRKVLDAPSEADAGPTTAISCPHGQLMPEQAAGAKRVLVPEGFWSFLYEDAISVQLDDPLDCPTFPLDSRECSQCCNELSEVTCLEDSLRLVKQRHRQNHEKLFLGKSMPLSLHCKYFLVPSSWISKWRNYINPTVKNSDKPETLDAVIDSLMCEKHSQLVERPPELVFRRNTISTRESAAGGLTIIFENDWKLLCEEWGGTETKGISAIIVDINESENSLAGSCKEMPICEDQLDNGSGNGQVVIKTFPEVCESCIGERESCELMRKLNYCNEEISIILVHGKEVPKSILEASKGFVETDRRVSKRARKIKNGSSTSLKVSASTTIYQLKMMIWESVGVVKENQILQKGDRTIDIDNESATLVDVNIFAGDQIIVRDSEIHENRDIADELFDEKMDTQHTEEGFRGTLLTSNISSQVV* 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0981 1074 MobiDBLite consensus disorder prediction 1 25 - -
Lan10g0981 1074 ProSiteProfiles DUSP domain profile. 511 603 IPR006615 GO:0004843
Lan10g0981 1074 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 107 448 IPR028889 -
Lan10g0981 1074 SUPERFAMILY Ubiquitin-like 968 1033 IPR029071 -
Lan10g0981 1074 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 344 362 IPR018200 GO:0004843|GO:0006511
Lan10g0981 1074 PANTHER UBIQUITINYL HYDROLASE 1-RELATED 2 1044 - -
Lan10g0981 1074 SMART dusp 529 600 IPR006615 GO:0004843
Lan10g0981 1074 ProSiteProfiles DUSP domain profile. 746 866 IPR006615 GO:0004843
Lan10g0981 1074 Gene3D Cysteine proteinases 94 448 - -
Lan10g0981 1074 CDD Peptidase_C19L 108 445 IPR033841 GO:0004843
Lan10g0981 1074 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 2 1044 - -
Lan10g0981 1074 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 108 123 IPR018200 GO:0004843|GO:0006511
Lan10g0981 1074 Pfam Ubiquitin carboxyl-terminal hydrolase 108 445 IPR001394 GO:0004843|GO:0016579
Lan10g0981 1074 CDD Ubl_USP48 964 1067 IPR044743 GO:0004197|GO:0004843|GO:0016579
Lan10g0981 1074 SUPERFAMILY DUSP-like 515 603 IPR035927 -
Lan10g0981 1074 SUPERFAMILY Cysteine proteinases 106 449 IPR038765 -
Lan10g0981 1074 Gene3D - 743 864 IPR035927 -
Lan10g0981 1074 Gene3D - 964 1039 - -
Lan10g0981 1074 ProSiteProfiles DUSP domain profile. 618 720 IPR006615 GO:0004843
Lan10g0981 1074 MobiDBLite consensus disorder prediction 10 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0981 Lan-Chr10 14842501 14855050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0981 105 385 Miscellaneous Gene Families AT4G31670 29.900 1.57e-26 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0981 - - gmx:100795556 1821.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan10g0981 10 14842501 14855050 Lan15g0993 15 19142475 19150623 PCT
Lan15g0993 15 19142475 19150623 Lan10g0981 10 14842501 14855050 PCT