Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0888 ATGGCATCATCAACATCACTCAAACTCTATTCATCTTCCCCAACTCTCAATTTCCATAACCATTCTCCATCTCTCTCTCCCTTTTCCCTTCGCCCCAAACTCACCACCGACCGCACCCTCACCCTCTCCGTCGCCCGTGAAGTCCCGGCGGAGCTCTCACCCATCAACGACGGAGCAATCGCCAATGAAACTAAAAAGAAGCCAGGATTGGAAAAAGACCATATTGCCCTTTGGCATAGATACGTGGAGTGGCTTTACCAACACAAGGAGTTGGGTCTATACATCGATGTGAGTCGGGTCGGGTTTACGGATGAGTTCGTGAACCAAATGGAGCCCCGTTTCGAGAAAGCGTTTCGTGCAATGGTGGATCTTGAGAAGGGTGCCATTGCTAATCCTGATGAGGGAAGAATGGTGGGACATTATTGGCTTAGGGACCCTAATCGTGCTCCTAATCAATTTCTTAAGACTCAGATTCAGAATACTCTTGAAGCTATATGCAATTTTGCTAATGATATAATCTCTGCTAAGATTAAGCCTCCGTCATCTCCGGAGGGTCGTTTTACTCAAATACTGTCGGTTGGAATTGGAGGTTCAGCTCTTGGACCACAGTTTGTTGCAGAGGCATTGGCTCCGGATAATCCTCCACTCAAGATAAGATTTGTTGACAACACAGATCCTGCTGGAATTGATCATCAGATTGCGCAACTTGGCCCTGAGCTAGCTTCCACACTTGTAATAGTAATTTCAAAGAGTGGAGGTACCCCTGAGACTAGAAATGGTTTATTAGAAGTACAGAAGGCCTTTCGTGAAGCAGGCTTGAATTTTTCGAAACAGGGTGTTGCTATAACACAAGAAGATTCTTTGTTGGATAACACTGCTAGAATTGAGGGGTGGTTAGCTAGGTTTCCCATGTTTGATTGGGTGGGAGGTAGAACATCGGTGATGTCTGCAGTTGGCCTGCTTCCTGCTGCTCTTCAGGGCATTGACATTAGAGAAATGCTTATTGGCGCATCACTGATGGATGAGGAAAATAGAAGTACCGTGTTAAAGAATAATCCTGCAGCTCTGCTGGCTTTATGTTGGTATTGGGCCACTGATGGTGTAGGATCCAAGGATATGGTTATCCTTCCATATAAGGACAGCCTGTTATTATTTAGCAGATACTTGCAGCAGCTGGTCATGGAATCTCTTGGCAAAGAGTTTGACTTGGATGGTAATCGGGTTAATCAAGGAATCAGTGTCTATGGAAATAAAGGAAGCACAGATCAGCATGCATATATTCAACAATTGAGGGAAGGTGTGCACAATTTCTTTGCGACATTCATTGAGGTGCTACGTGATAGACCCCCAGGTCATGATTGGGAACTCGAACCTGGTGTTACATGTGGTGACTACCTATTTGGCATGCTACAGGGAACAAGGTCAGCTCTGTACGCTAATAATCGAGAGTCTATCACTGTCACTGTAGAAGAAGTGACACCAAGATCAGTTGGTGCTCTTATTGCACTCTACGAACGAGCAGTAGGGATATATGCGTCCCTTGTCAACATCAATGCTTATCATCAACCTGGTGTGGAAGCTGGTAAAAAAGCAGCAGGTGAAGTATTAGCACTTCAGAAGCGAGTGTTAACAGTGTTAAATGAGGCGAGCTGCAAACAACCTGTTGAGCCATTGACACTGGAAGAAGTAGCTGAGCGCTGCCATGCTCCAGAAGATATTGAAATGATTTACAAGATTATAGCTCATATGGCTGCCAATGATAGAGCGCTAATTGCTGAAGGAAGCTGCGGTTCACCACGTAGTATCAAGGTTTTTCTTGGAGAGTGTAACATTGATGATTTGTATGTTTGA 1851 0.4489 MASSTSLKLYSSSPTLNFHNHSPSLSPFSLRPKLTTDRTLTLSVAREVPAELSPINDGAIANETKKKPGLEKDHIALWHRYVEWLYQHKELGLYIDVSRVGFTDEFVNQMEPRFEKAFRAMVDLEKGAIANPDEGRMVGHYWLRDPNRAPNQFLKTQIQNTLEAICNFANDIISAKIKPPSSPEGRFTQILSVGIGGSALGPQFVAEALAPDNPPLKIRFVDNTDPAGIDHQIAQLGPELASTLVIVISKSGGTPETRNGLLEVQKAFREAGLNFSKQGVAITQEDSLLDNTARIEGWLARFPMFDWVGGRTSVMSAVGLLPAALQGIDIREMLIGASLMDEENRSTVLKNNPAALLALCWYWATDGVGSKDMVILPYKDSLLLFSRYLQQLVMESLGKEFDLDGNRVNQGISVYGNKGSTDQHAYIQQLREGVHNFFATFIEVLRDRPPGHDWELEPGVTCGDYLFGMLQGTRSALYANNRESITVTVEEVTPRSVGALIALYERAVGIYASLVNINAYHQPGVEAGKKAAGEVLALQKRVLTVLNEASCKQPVEPLTLEEVAERCHAPEDIEMIYKIIAHMAANDRALIAEGSCGSPRSIKVFLGECNIDDLYV* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0888 616 ProSitePatterns Phosphoglucose isomerase signature 2. 512 529 IPR018189 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 PRINTS Glucose-6-phosphate isomerase signature 190 209 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 PRINTS Glucose-6-phosphate isomerase signature 302 320 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 PRINTS Glucose-6-phosphate isomerase signature 378 399 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 PRINTS Glucose-6-phosphate isomerase signature 480 498 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 PRINTS Glucose-6-phosphate isomerase signature 498 512 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 PRINTS Glucose-6-phosphate isomerase signature 512 525 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 24 615 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 Pfam Phosphoglucose isomerase 477 537 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 Pfam Phosphoglucose isomerase 124 446 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 CDD SIS_PGI_1 159 325 IPR035476 -
Lan15g0888 616 ProSiteProfiles Glucose-6-phosphate isomerase family profile. 26 545 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 PANTHER GLUCOSE-6-PHOSPHATE ISOMERASE 24 615 - -
Lan15g0888 616 Gene3D - 330 525 - -
Lan15g0888 616 SUPERFAMILY SIS domain 79 539 IPR046348 GO:0097367|GO:1901135
Lan15g0888 616 CDD SIS_PGI_2 371 535 IPR035482 -
Lan15g0888 616 Hamap Glucose-6-phosphate isomerase [pgi]. 95 539 IPR001672 GO:0004347|GO:0006094|GO:0006096
Lan15g0888 616 Gene3D - 140 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0888 Lan-Chr15 18161402 18166541 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0888 K01810 - gmx:100791285 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0888 15 18161402 18166541 Lan14g0686 14 13816807 13821936 LSH
Lan15g0888 15 18161402 18166541 Lan3g1550 3 26989002 26992043 LSH