Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0751 ATGATATACCCTTCTATCTTATTTTCCAATATGTCTATCCTATCTCCCACTGAATTGCAAAGAATTTTTGAGAAGATGGACATAAATGGTGATGGCTTTGTGAGCCTTGAAGAGCTCAATTATCTGCTCCAAAAGATAGGTTTCAAATTTAGTTTAGATGAGTTAGAATCTCTAATGGAAAAGAAGAGCCTTGAATTCAACGAGTTCTTGTTCTTTTATAATTCCATATCTAAGCAGAATAATGGGAAGATTAGAAGTGATGATGATGAAAATAATCATGATGATGATGATGGTATTGATATTATTGAGGAGTTGGAGAGTGACCTTGTGGAGACTTTCAAAGTGTTTGAATTGGAGTGTGTTTTGAAGAGGCTTGGTTTGTGGGATGGTAAAGATTGTAGAAGCATGATTTGCTTCTATGATACCAATTTGGATGGTCAACTTGATTTTCAGGAATTCAAGAACATGATGTTGCTTACCATTGCTGTAAACTAA 495 0.3455 MIYPSILFSNMSILSPTELQRIFEKMDINGDGFVSLEELNYLLQKIGFKFSLDELESLMEKKSLEFNEFLFFYNSISKQNNGKIRSDDDENNHDDDDGIDIIEELESDLVETFKVFELECVLKRLGLWDGKDCRSMICFYDTNLDGQLDFQEFKNMMLLTIAVN* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0751 164 Gene3D - 4 76 - -
Lan15g0751 164 Pfam EF-hand domain pair 126 158 IPR002048 GO:0005509
Lan15g0751 164 Pfam EF hand 18 45 IPR002048 GO:0005509
Lan15g0751 164 Gene3D - 78 160 - -
Lan15g0751 164 ProSiteProfiles EF-hand calcium-binding domain profile. 14 49 IPR002048 GO:0005509
Lan15g0751 164 ProSitePatterns EF-hand calcium-binding domain. 27 39 IPR018247 -
Lan15g0751 164 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 11 160 - -
Lan15g0751 164 CDD EFh 18 70 IPR002048 GO:0005509
Lan15g0751 164 SUPERFAMILY EF-hand 18 158 IPR011992 -
Lan15g0751 164 SMART efh_1 18 46 IPR002048 GO:0005509
Lan15g0751 164 SMART efh_1 132 160 IPR002048 GO:0005509
Lan15g0751 164 ProSiteProfiles EF-hand calcium-binding domain profile. 128 163 IPR002048 GO:0005509
Lan15g0751 164 PANTHER CALCIUM-BINDING PROTEIN CML44-RELATED 11 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0751 Lan-Chr15 16600091 16600971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0751 12 158 EF-hand Containing Proteins AT1G21550 35.185 4.74e-22 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0751 K13448 - gmx:100500561 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0751 15 16600091 16600971 Lan3g1608 3 27809973 27810557 LSH