Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0717 ATGGTGGAATCAGAGCGAATCCAAAATCCTTGGATGGCTTTAGAACAGAGTGCAGTTCCAGCCGTTGAAATGAACGGACAAGATTTATCCTTATTCGAATCCCTGGATGCCCAAGGGTGTATTTGTTCTCCTCCGCCGCAGTCACCGGAGTCTTCCGGTGCTGGTGATTATAAATTGGGATTTGTCGAACGAAGTTTCTCTGCTGCCGGCGCGGCCGTCCTTTCCGCTATCATTGTCAATCCTCTTGATGTTGCCAAGACAAGGTTGCAGGCGCAGGCTGCAGGGGTTTCTTATTCTCATCCGCTCAGTAATATGACTAGTCGGATGGCTTATTTTGGGCCAACTATGATGTTTGCTGATTTAAGATGTTCTCCATCATGTGCCCGTGCTGGAATAGAAGGCACAGTATCAATTTGTCCTCCCGAATGTTTTCGGTACAAAGGAACACTGGATGTCCTCTACAAAATTATACATCAGGAAGGATTTGCTAGACTATGGAGAGGCACAAATGCAGGCTTGGCACTTGCAATACCAACTGTAGGAATTTACCTTCCTTGCTATGACATATTCCGCATCTGGTTGGAGGAATTCACATCCAAAAGTGCTCCAAGTACAACCGCATATGTGCCTCTAGTGGCTGGTTCATTGGCACGCTCACTAGCTTGTGCAACTTGTTATCCTATTGAACTTGCCAGAACTCGCATGCAGGCATTTAAAGAGACTCAAATTAGTAAAAAGCCTCCTGGAGTGGTTCAGACTCTACTTGGTGTTGTCTCACAAGTCAAGAACACAAATAGTCCACAGAACAGCTTACAAGGTTATCGTGCCCTGTGGACTGGCATGGGATCTCAACTTGCCCGGGATGTACCCTTCTCTGCGATTTGTTGGTCAACACTCGAACCAACTAGAAGAGAACTTCGTAGACTGGTTGGAGGTGATGATGCCAATGCATTGGGTGTTCTTGGGGCAAATTTTTCTGCTGGTTTTGTTGCTGGAACTTTAGCAGCCGGAGCTACATGTCCGCTAGATGTTGCAAAAACTCGACGACAAATAGAGAGGGATCCCGTGAAGGCATTGAGAATGACTACAAGAAAGACACTGATGGAGATTTGGAGAGATGGAGGCATGAAAGGACTTTTTACCGGGTTTGGTCCACGAGTTGGTAGGGCAGGGCCTTCTGTTGGAATTGTGGTTTCGTTTTATGAAGTTGTAAAGTATGTTCTTAATCATCAGTACTCAACGTCCTGA 1248 0.4615 MVESERIQNPWMALEQSAVPAVEMNGQDLSLFESLDAQGCICSPPPQSPESSGAGDYKLGFVERSFSAAGAAVLSAIIVNPLDVAKTRLQAQAAGVSYSHPLSNMTSRMAYFGPTMMFADLRCSPSCARAGIEGTVSICPPECFRYKGTLDVLYKIIHQEGFARLWRGTNAGLALAIPTVGIYLPCYDIFRIWLEEFTSKSAPSTTAYVPLVAGSLARSLACATCYPIELARTRMQAFKETQISKKPPGVVQTLLGVVSQVKNTNSPQNSLQGYRALWTGMGSQLARDVPFSAICWSTLEPTRRELRRLVGGDDANALGVLGANFSAGFVAGTLAAGATCPLDVAKTRRQIERDPVKALRMTTRKTLMEIWRDGGMKGLFTGFGPRVGRAGPSVGIVVSFYEVVKYVLNHQYSTS* 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0717 415 Gene3D Mitochondrial carrier domain 136 413 IPR023395 -
Lan15g0717 415 ProSiteProfiles Solute carrier (Solcar) repeat profile. 319 407 IPR018108 -
Lan15g0717 415 Pfam Mitochondrial carrier protein 206 306 IPR018108 -
Lan15g0717 415 Pfam Mitochondrial carrier protein 59 194 IPR018108 -
Lan15g0717 415 Pfam Mitochondrial carrier protein 323 410 IPR018108 -
Lan15g0717 415 ProSiteProfiles Solute carrier (Solcar) repeat profile. 59 193 IPR018108 -
Lan15g0717 415 SUPERFAMILY Mitochondrial carrier 60 403 IPR023395 -
Lan15g0717 415 ProSiteProfiles Solute carrier (Solcar) repeat profile. 205 305 IPR018108 -
Lan15g0717 415 Gene3D Mitochondrial carrier domain 43 135 IPR023395 -
Lan15g0717 415 PANTHER FI19922P1-RELATED 1 415 IPR045315 GO:1990542
Lan15g0717 415 PANTHER BNACNNG35730D PROTEIN 1 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0717 Lan-Chr15 15987742 15992777 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0717 155 405 Organic Solute Cotransporters AT3G55640 26.848 1.90e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0717 K15119 - gmx:100778501 655.595
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0717 15 15987742 15992777 Lan14g0554 14 11747148 11751296 LSH