Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0554 ATGGCTTCCGAACAAAGTGCAGTAGTTCCAGCCATCGAAATGAACGGACAAGATTTATTGTTATGCGAATCCAACGATACACAGGGATGCATTTGTTCTCCTCCGCCGCAACCGGTGGAAGCGTCCGGTGGTGATTATAAGTTGGGATTCGTCGATCGAAGTTTCTCTGCCGCCGGTGCCGCTTTCATCTCCGCTATCATTGTCAATCCTCTTGATGTTGCCAAGACACGGTTGCAGGCACAGGCTGCAGGGGTTTCTTACTCTCATCCGCTAAGTAATGTGACTAGTCGTATGGCTTATTTTGGGCCAACTATGATGTTTGCTGACTTAAGATGTTCTCCGTCATGTACTCGTGCTGGAATCGAAGGTACAGTCTCAATTTGTCCTCCTGAGTGTTTTCGGTACAAAGGAACACTGGATGTTTTCTACAAAATTGTACATCAGGAAGGATTTGCTAGGCTATGGAGAGGCACAAATGCAAGCTTGGCACTCGCAGTGCCAACTGTAGGAATTTATCTTCCTTTCTATGACATATTCCGCAACTGGTTGGAGGAATTCACATCCAAAAGTGCTCCGAGCATAACTCCATATGTGCCTTTAGTAGCTGGTTCATTGGCACGCTCACTAGCGTGTGCAACTTGTTATCCTATTGAACTTGCAAGAACTCGCATGCAGGCATTTAAAGAGACTCAAATTGGTAAGAAGCCTCCTGGAGTGGTTCAGACTCTACTAGGTGTTGTCTCACAAGTCAAGAGCACAAATAGTGCACAGAACAGCTTGCAAGGTTATCGTGCCCTGTGGACTGGCATGGGAGCTCAACTTGCCCGGGATGTACCCTTCTCTGCGATATGTTGGTCAACCCTGGAACCTACTAGAAGTGAACTCCGTAGACTGGTTGGAGGCGATGATGCCAATGCATTGGGTGTTCTTGGGGCAAACTTTACTGCTGGTTTTGTTGCAGGAACCATAGCAGCCGGAGCTACATGTCCGCTAGATGTTGCAAAAACTAGACGACAAATAGAGATGGATCCAGTGAAGGCATTGAGAATGACTACAAGACAGACACTGATGGAGATTTGGAGAGATGGAGGCTTTAAGGGACTTTTTACAGGTTTTGGTCCACGAGTTGGTAGAGCAGGCCCCTCCGTTGGAATTGTGGTTTCATTTTATGAAGTTGTAAAGTATGTTCTACATCACCAGTATTCACCATCATGA 1215 0.465 MASEQSAVVPAIEMNGQDLLLCESNDTQGCICSPPPQPVEASGGDYKLGFVDRSFSAAGAAFISAIIVNPLDVAKTRLQAQAAGVSYSHPLSNVTSRMAYFGPTMMFADLRCSPSCTRAGIEGTVSICPPECFRYKGTLDVFYKIVHQEGFARLWRGTNASLALAVPTVGIYLPFYDIFRNWLEEFTSKSAPSITPYVPLVAGSLARSLACATCYPIELARTRMQAFKETQIGKKPPGVVQTLLGVVSQVKSTNSAQNSLQGYRALWTGMGAQLARDVPFSAICWSTLEPTRSELRRLVGGDDANALGVLGANFTAGFVAGTIAAGATCPLDVAKTRRQIEMDPVKALRMTTRQTLMEIWRDGGFKGLFTGFGPRVGRAGPSVGIVVSFYEVVKYVLHHQYSPS* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0554 404 Gene3D Mitochondrial carrier domain 36 111 IPR023395 -
Lan14g0554 404 Pfam Mitochondrial carrier protein 312 398 IPR018108 -
Lan14g0554 404 Pfam Mitochondrial carrier protein 194 292 IPR018108 -
Lan14g0554 404 Pfam Mitochondrial carrier protein 48 184 IPR018108 -
Lan14g0554 404 Gene3D Mitochondrial carrier domain 115 401 IPR023395 -
Lan14g0554 404 SUPERFAMILY Mitochondrial carrier 51 392 IPR023395 -
Lan14g0554 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 308 396 IPR018108 -
Lan14g0554 404 PANTHER BNACNNG35730D PROTEIN 43 403 - -
Lan14g0554 404 PANTHER FI19922P1-RELATED 43 403 IPR045315 GO:1990542
Lan14g0554 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 48 182 IPR018108 -
Lan14g0554 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 194 294 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0554 Lan-Chr14 11747148 11751296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0554 144 394 Organic Solute Cotransporters AT3G55640 27.237 5.67e-18 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0554 K15119 - gmx:100810960 636.336
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0717 15 15987742 15992777 Lan14g0554 14 11747148 11751296 LSH