Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0706 ATGTCACAGACTCTTCGTTTGGGTGTTGCTGTAGTTGGAAACATCGCCTCAGTATCTCTGTATGCTGCACCAATAACTACCTTCAAAAGGGTTATAAGGAAGAAAAGCACAGAAGAGTTTTCATGCATTCCTTACATCATTGGGCTATTTAACTGTCTCCTTTTTACTTGGTATGGATTACCTGTTGTAAGCAAGAAGTGGGAAAATTTCCCTCTTGTCACTGTTAATGGAGTTGGGATTGTTCTTGAGTTATCCTATGTTCTTATTTATTTCTGCTATGCTTCTTCCAAAGGAAAGGCAAAGGTAGCTATGGTAGCAATACCAGTTCTAGTAGTGTTCTGCATTACTGCTATAGTCTCAGCTTTTGCCTTTCATGATAATGCACACAGAAAGCAACTTGTGGGTAGCATTGGCTTAGTTGTTTCAGTAGCAATGTATGGATCTCCTCTTGTTGCAATGAAGAAAGTAATACAGACCAAGAGTGTGGAATTCATGCCACTACCCTTATCTTTGTGTACATTCTTAGCTTGTACTCTTTGGTTAACTTATGGAGTCCTCATTCGTGATATATTTGTTGCGGGACCAAGTGTAGTTGGAATTCCATTGAGCATTCTTCAGCTTGTCCTTCATTGCAAATACAGAAAAAAGAGTGTTGTGGAAGAACCAAACAAAGAGGACTTGGAAAAGGGTAACTTAGATAAGGTGGAGTTAGAAAAGTTGAGCTTAGAAATGGAGGATGTGGAAAAGAATGTGACAATTCATAAGAATGGCAACTTGTGA 780 0.3897 MSQTLRLGVAVVGNIASVSLYAAPITTFKRVIRKKSTEEFSCIPYIIGLFNCLLFTWYGLPVVSKKWENFPLVTVNGVGIVLELSYVLIYFCYASSKGKAKVAMVAIPVLVVFCITAIVSAFAFHDNAHRKQLVGSIGLVVSVAMYGSPLVAMKKVIQTKSVEFMPLPLSLCTFLACTLWLTYGVLIRDIFVAGPSVVGIPLSILQLVLHCKYRKKSVVEEPNKEDLEKGNLDKVELEKLSLEMEDVEKNVTIHKNGNL* 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0706 259 Coils Coil 237 257 - -
Lan15g0706 259 PANTHER RAG1-ACTIVATING PROTEIN 1 4 255 - -
Lan15g0706 259 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 4 255 - -
Lan15g0706 259 Gene3D - 10 105 - -
Lan15g0706 259 Gene3D - 131 227 - -
Lan15g0706 259 Pfam Sugar efflux transporter for intercellular exchange 132 216 IPR004316 GO:0016021
Lan15g0706 259 Pfam Sugar efflux transporter for intercellular exchange 10 97 IPR004316 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0706 Lan-Chr15 15779669 15781513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0706 1 258 Miscellaneous Gene Families AT5G53190 54.615 1.20e-97 285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0706 K15382 - gmx:100813119 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0706 15 15779669 15781513 Lan14g0549 14 11660941 11663490 LSH