Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0549 ATGGTAGAGACCATTCGTTTAGGTGTTGCTGTAATGGGCAATATTGCTTCAGTGTCTCTTTATGCTGCACCAATAACCACATTTAGAAGGGTGATAAGGAAGAAAAGCACAGAAGAGTTTTCATGCATTCCTTACATCATTGGGCTTCTTAACTGTCTCATTTTCACTTGGTATGGTTTACCTGTTGTAAGTAACAAGTGGGAGAATTTTCCTCTTGTCACAGTTAATGGGGTTGGAATTGTTCTTGAGTTATCCTATGTTCTCATTTATTTCTGCTATGCTTCATCCAAAGGAAAGGCAAAGGTAGCAATGATCGCAATACCAATTCTGCTAGTATTTTGCATTACTGTTACAGTCTCAGCTTTTGCTTTTCATGATAATGAACACAGAAAGCTACTTGTGGGTAGCGTTGGCTTATGTGTTTCAGTAGCAATGTATGGATCTCCTCTTGTTGCAATGGGACCAAGTGTAATTGGAATTCCATTGAGCATTCTTCAGCTTGCCCTTCATTGCAAATACCGGAAAAGGAGTGTGCAAGAATCAAACAAAGAGGATTTGGAAAAGGGTAACTTAGAGAAGGTGGAGTTATGTGAACTTGGAAATGGAGGATGTGGAAAAGAATGTGACAATTCATAA 636 0.3899 MVETIRLGVAVMGNIASVSLYAAPITTFRRVIRKKSTEEFSCIPYIIGLLNCLIFTWYGLPVVSNKWENFPLVTVNGVGIVLELSYVLIYFCYASSKGKAKVAMIAIPILLVFCITVTVSAFAFHDNEHRKLLVGSVGLCVSVAMYGSPLVAMGPSVIGIPLSILQLALHCKYRKRSVQESNKEDLEKGNLEKVELCELGNGGCGKECDNS* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0549 211 PANTHER RAG1-ACTIVATING PROTEIN 1 3 153 - -
Lan14g0549 211 PANTHER RAG1-ACTIVATING PROTEIN 1 154 197 - -
Lan14g0549 211 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 154 197 - -
Lan14g0549 211 PANTHER BIDIRECTIONAL SUGAR TRANSPORTER SWEET 3 153 - -
Lan14g0549 211 Pfam Sugar efflux transporter for intercellular exchange 10 97 IPR004316 GO:0016021
Lan14g0549 211 Gene3D - 10 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0549 Lan-Chr14 11660941 11663490 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0549 1 211 Miscellaneous Gene Families AT5G53190 40.769 5.15e-67 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0549 K15382 - gmx:100813119 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0706 15 15779669 15781513 Lan14g0549 14 11660941 11663490 LSH