Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0677 ATGGAGTCTCTGGAACTTTCTCGTGTTCTTCTTCTCACCTCATCATCGTCACTACTAACAACAAAGGCCATAAGGCAATTGGGTTTTCGTTGTTTGTTGAAAAAACCAAATAAAAATGGTAACTTGCGTCTTACCAGATCATTTTCTGGTCACACTGGAGGTGGTCCTGCACCTTCTGCTTCACAAGCAGAAGATGAACATGAAGATGATGATTTTGGGTCTATTGTTGCTTTTAACTTGGTTCCAGAGTCTGGGAAAATAACTGAAGAAGATGCAACTAGCAATGGAGTTGAAGTACCCGAGGCTGGGGATGTAGAAGAAGAGAAAGTTCAGAATAGAGTATCCTATAACATTGTTTTTGTTACTGCTGAAGCTGCACCATATTCAAAGACCGGTGGACTTGGAGATGTTTGTGGTTCATTGCCAATAGCACTAGCAGCTCGCGGACACCGTGTCATGGTTGTCTCTCCCATGTACATAAATAGTACTCCCGGGGATGAAAAGTTTTCTGGTGCTGTTGATCTGAATCGCCGCATCCAACTATATTGCTTTGGTAGTGTTCAAGAAGTTGGCTTTTTCCATGAGTTTAGGGAAGGTGTTGATTGGGTGTTTGTGGATCACCCCTCATTCCGTAGACCAGGGAATCCATATGGGGACAAATTTGGGACTTTTGGGGATAATCAGTTTCGGTTCACTTTACTTTCCTATGCAGCATGTGAAGCCCCATTGGTGCTTCCTTTAGGAGGGTTCACTTATGGAGATAAGTGTTTATTCCTTGTCAATGACTGGCATGCCAGCCTAGTTCCAACACTTTTGGCAGCGAAGTATCGTCCACATGGGGTGTATAAGGATGCACGTAGTATATTAGTGATACATAATATTGCACATCAGGGTGTGGAACCTGCAATTACATACGGTAATTTGGGGCTACCTCCAGAATGGTATGGATCTCTGGAATGGGTGTTTCCTAATTGGGCAAGGATGCATGCTCTTGACAAGGGTGAAGCTGTCAATTTTCTAAAAGGTGCCATTGTAACATCGGACCGGATACTAACAGTAAGCAAGGGTTATTCCTGGGAAATAACAACTAGGGAAGGTGGATATGGTCTACACGAGCTATTAAGCAGTCGAAAAAGTGTACTCAGTGGGATCACAAATGGAATTGATGAAACTGAATGGGATCCATCAATTGATCAACATATTGCATTCAACTATTCTATCGATGACCTTTCTGGAAAGGTCAAATGCAAGATTTCTTTGCAGGAGGAATTGGGTCTTGCAGTGAGGCCTGAATGTCCAGTGATTGGATTCATTGGAAGACTAGACTACCAGAAAGGTATTGACCTGATTCGCATGGCGATTCCAGAGATCATGGAGAATGATGTTCAGTTTGTAATGCTTGGTTCGGGAAACCCTGCGTATGAAGACTGGATGAGAGCAACAGAGTCAGCTTATAGAGATAAATTCCGGGGTTGGGTTGGATTTAATGTTCCAATATCTCATAAGATTACTGCTGGCTGTGATATACTGTTAATGCCATCCGCGTTCGAGCCCTGTGGACTAAATCAGTTGTATGCAATGAGATATGGAACAATACCTGTGGTTCATGAAACTGGGGGACTAAGAGATACAGTTCAAAGTTTTAATCCATATGGTGAAGGAACCAATGGTGAAGGTGTCGGCACAGGGTGGACGTTTTCTCCACTTACAAAGGAGAGCATGTTAGTGGCTCTTAGACATGCTATTAAAACATACAAAGAACACAAGTCTTCTTGGAATGGATTGATGAAAAGAGGTATGACAAGAGATTACACATGGGTAAATGCTGCCACTCAATATGAGCAAGTTATTGAGTGGGCATTCATGGATCCACCCTATTGTTGTTGA 1887 0.4271 MESLELSRVLLLTSSSSLLTTKAIRQLGFRCLLKKPNKNGNLRLTRSFSGHTGGGPAPSASQAEDEHEDDDFGSIVAFNLVPESGKITEEDATSNGVEVPEAGDVEEEKVQNRVSYNIVFVTAEAAPYSKTGGLGDVCGSLPIALAARGHRVMVVSPMYINSTPGDEKFSGAVDLNRRIQLYCFGSVQEVGFFHEFREGVDWVFVDHPSFRRPGNPYGDKFGTFGDNQFRFTLLSYAACEAPLVLPLGGFTYGDKCLFLVNDWHASLVPTLLAAKYRPHGVYKDARSILVIHNIAHQGVEPAITYGNLGLPPEWYGSLEWVFPNWARMHALDKGEAVNFLKGAIVTSDRILTVSKGYSWEITTREGGYGLHELLSSRKSVLSGITNGIDETEWDPSIDQHIAFNYSIDDLSGKVKCKISLQEELGLAVRPECPVIGFIGRLDYQKGIDLIRMAIPEIMENDVQFVMLGSGNPAYEDWMRATESAYRDKFRGWVGFNVPISHKITAGCDILLMPSAFEPCGLNQLYAMRYGTIPVVHETGGLRDTVQSFNPYGEGTNGEGVGTGWTFSPLTKESMLVALRHAIKTYKEHKSSWNGLMKRGMTRDYTWVNAATQYEQVIEWAFMDPPYCC* 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0677 628 Gene3D Glycogen Phosphorylase B; 390 603 - -
Lan15g0677 628 MobiDBLite consensus disorder prediction 43 68 - -
Lan15g0677 628 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 117 617 IPR011835 GO:0004373
Lan15g0677 628 Pfam Starch synthase catalytic domain 117 375 IPR013534 -
Lan15g0677 628 Gene3D Glycogen Phosphorylase B; 136 616 - -
Lan15g0677 628 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 90 627 - -
Lan15g0677 628 Pfam Glycosyl transferases group 1 433 585 IPR001296 GO:0016757
Lan15g0677 628 CDD GT5_Glycogen_synthase_DULL1-like 117 619 - -
Lan15g0677 628 PANTHER STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 90 627 - -
Lan15g0677 628 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 105 621 - -
Lan15g0677 628 Hamap Glycogen synthase [glgA]. 116 620 IPR011835 GO:0004373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0677 Lan-Chr15 15427847 15435987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0677 117 617 Glycosyltransferase AT3G01180 50.787 1.56e-167 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0677 K00703 - gmx:100807354 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0677 15 15427847 15435987 Lan15g0677 15 15427847 15435987 ECH
Lan15g0677 15 15427847 15435987 Lan14g0527 14 10945373 10954594 LSH