Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0527 ATGATGGAGTCTCTGGAACTTTCTCGTGTTCTTCTTCTAACATCATCATTATCATTATCACTAATACCACCAACAACAAAGACCATAAGGCAATTGGGTTTTCGTAGTTTGGTTAAGAAAGCAAATAAATATGCAAACTTGCGTCTCACCAGATCATTTTCTGGCCACACTGGAAATGGTGCTGCACATGCTGCTTCACAAGGAAAAGGTGAAGATGAAATGGGTCTTCTATTAGCTAGAGAGATTGATGAATTTGGTTCTATTGTTGGGTTTAATTTGATTCCTGGGTCTGGGAAAATAACTGAAGATGCAACTAGCAATGAAGTTGAAGTACCTGAGGCTAGGGGTGTAGAAGAACATAAAGTTCAGGCTAGAGTATCCTATAGCATTGTTTTTGTTACTGCTGAAGCTGCACCATATTCAAAGACCGGTGGACTTGGAGATGTTTGTGGTTCTTTGCCAATAGCACTAGCAGCTCGCGGACACCGTGTCATGGTTATTTCACCCAGGTACATACATGGTACTCCTGAGGATAAGAAGTTTTCTGGTGCTGTTGATCTGGACTGCCGCATCAAACTATATTGCTTTGGTGCTGTTCAAGAAGTTGGCTTTTTCCATGAGTTTAGGGACGGTGTTGATTGGATATTTGTAGATCACCCCTCATTCCATAGACCAGGGAATCTATACGGGGACAAATTTGGGACTTTCGGGGATAATCAGTTTCGGTTCACTTTACTTTCCCATGCAGCATGTGAAGCCCCATTGGTGCTTCCATTGGGAGGGTACACTTATGGAGATAAATGTTTATTCCTTGTTAATGATTGGCATGCCGGCCTAGTTCCAATACTTTTGGCAGCGAAGTATCGTCCACATGGGGTGTATAAGGATGCTCGTAGCATATTAGTGATACATAACATTGCACATCAGGGTGTGGAACCTGCAATTACATATAGTAATTTGGGGCTACCTCCAGAATGGTATGGAGCTCTGGAATGGGTGTTCCCTAATTGGGCCAGGATGCATGCTCTTGACACGGGTGAAGCTGTCAATTTTCTTAAAGGTGCCATTGTAACAGTCGATCGGATACTAACAGTAAGCAAGGGTTATTCCTGGGAGATAACAACTAGTGAAGGTGGATATGGTCTACATGAGCTATTAAGCAGTCGGAAAAGTGTTCTCAATGGGATTACAAATGGAATTGATGAAAATGAATGGGATCCATCAACTGATAAACATATTGCTTACAACTATTCTGCTGATGACCTTTCTGGAAAGGTTAAATGCAAGATTTCTCTGCAGAAGGAGTTGGGTCTTGCAGAGAGGCCTGAATGTCCAATGATTGGATTTATTGGAAGATTAGACTACCAGAAAGGTATTGACCTGATTCGCATGGCGATTCCAGAGATAATGGAGAATGATGTTCAGTTCGTAATGCTTGGTTCGGGAAACCCTGAATTTGAAGACTGGATGAGAGCAACAGAGTCAACTTATAGAGATAAATTTCGGGGTTGGGTTGGATTTAATGTTCCAGTATCACATAAGATAACTGCGGGATGTGATATACTGTTAATGCCATCCACATTTGAACCCTGTGGACTAAACCAGTTGTATGCAATGAGATATGGAACAGTACCTGTGGTTCATGAAACTGGAGGACTAAGAGATACAGTTCAAAATTTTAATCCATATGCTGAAGGAACCAATGGTGAAGGTGAAGGTGAAGGCACAGGGTGGACGTTTTCTCCATTAACAAAGGAGAGCATGTTAGTGGCTCTTGGATATGCCATTAGAACATACAATGAATACAAGTCTTCTTGGAAGGGATTGATGAAAAGAGGAATGGCAAAAGACTACACATGGGTAAATGCTGCCACTCAATATGAGCAAGTCATTGAATGGGCATTCATGGATCCACCCTATTGTTAA 1926 0.4174 MMESLELSRVLLLTSSLSLSLIPPTTKTIRQLGFRSLVKKANKYANLRLTRSFSGHTGNGAAHAASQGKGEDEMGLLLAREIDEFGSIVGFNLIPGSGKITEDATSNEVEVPEARGVEEHKVQARVSYSIVFVTAEAAPYSKTGGLGDVCGSLPIALAARGHRVMVISPRYIHGTPEDKKFSGAVDLDCRIKLYCFGAVQEVGFFHEFRDGVDWIFVDHPSFHRPGNLYGDKFGTFGDNQFRFTLLSHAACEAPLVLPLGGYTYGDKCLFLVNDWHAGLVPILLAAKYRPHGVYKDARSILVIHNIAHQGVEPAITYSNLGLPPEWYGALEWVFPNWARMHALDTGEAVNFLKGAIVTVDRILTVSKGYSWEITTSEGGYGLHELLSSRKSVLNGITNGIDENEWDPSTDKHIAYNYSADDLSGKVKCKISLQKELGLAERPECPMIGFIGRLDYQKGIDLIRMAIPEIMENDVQFVMLGSGNPEFEDWMRATESTYRDKFRGWVGFNVPVSHKITAGCDILLMPSTFEPCGLNQLYAMRYGTVPVVHETGGLRDTVQNFNPYAEGTNGEGEGEGTGWTFSPLTKESMLVALGYAIRTYNEYKSSWKGLMKRGMAKDYTWVNAATQYEQVIEWAFMDPPYC* 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0527 641 Pfam Glycosyl transferases group 1 444 576 IPR001296 GO:0016757
Lan14g0527 641 PANTHER STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 107 641 - -
Lan14g0527 641 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 117 635 - -
Lan14g0527 641 Pfam Starch synthase catalytic domain 130 387 IPR013534 -
Lan14g0527 641 Hamap Glycogen synthase [glgA]. 128 634 IPR011835 GO:0004373
Lan14g0527 641 Gene3D Glycogen Phosphorylase B; 148 630 - -
Lan14g0527 641 PANTHER GRANULE-BOUND STARCH SYNTHASE 1, CHLOROPLASTIC/AMYLOPLASTIC 107 641 - -
Lan14g0527 641 Gene3D Glycogen Phosphorylase B; 402 617 - -
Lan14g0527 641 CDD GT5_Glycogen_synthase_DULL1-like 130 633 - -
Lan14g0527 641 TIGRFAM glgA: glycogen/starch synthase, ADP-glucose type 129 631 IPR011835 GO:0004373
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0527 Lan-Chr14 10945373 10954594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan14g0527 101 631 Glycosyltransferase AT3G01180 48.699 5.06e-170 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0527 K00703 - gmx:100807354 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0677 15 15427847 15435987 Lan14g0527 14 10945373 10954594 LSH