Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0633 ATGCAACCGTTAAGAATGAAGACTTGTTTGGATATGAAGTTACCGGTTTTCACGTGTTTGGATGAAGGAATTAGAACGCAACGGGTGAACTGTAGGAACCTGAGGAGAAGGAATTGTAGAGGAATCGTAGCTTGTAATGGGAACCGTGGAGGAGAGAGTTCAAGTTCAAGGTCGTTTTTCTGTCGGAACCATAACTATGCTCTCTTGAAGCATCAAATGGAGGTTGCTGCAAAATCCGAGGATTATGAAGAGGCTGCGAGGATTCGTGACTCGCTGAAATGTTTTGAAGAGGATGTGCCAGTTTTGCGTTTGCGGAAATTGTTGAAGGAAGCAATTGAGGATGAGAGATTTCAGGATGCAGCTAGATATCGTGATGAGCTAAAAGACATTGCTCCATATTCTCTCTTAAAATGTTCCAGTGATGCTACAACCTTGGGAATCAGAGTTCAAGTTAGGAGTGCATATATAGAGGGCAGAAGTCAGCCTTCAGAGGATATATACTTCTTTTCTTATCGAATCAGAATTACCAATAACTCAAACCGTCCTGTTCAACTTCTCCGAAGACATTGGATTATAACTGATGCTAATGGGAAAACTGAAAATGTCTGGGGGCTTGGGGTTATTGGTGAACAGCCAGCTATACTTCCCAGGACTAGCTTTGAATACTCATCTGCATGCCCATTAAGCACACAAAATGGCAGAATGGAAGGTGACTTTGAGATGATACATATTGACAAAGTAGGCTCAAGATCTTTTAACGTGGCCATTGCTCCCTTTTCCCTCTCTCTTCTTGGAGATGGTGATGGTGATACTATTTGA 819 0.4225 MQPLRMKTCLDMKLPVFTCLDEGIRTQRVNCRNLRRRNCRGIVACNGNRGGESSSSRSFFCRNHNYALLKHQMEVAAKSEDYEEAARIRDSLKCFEEDVPVLRLRKLLKEAIEDERFQDAARYRDELKDIAPYSLLKCSSDATTLGIRVQVRSAYIEGRSQPSEDIYFFSYRIRITNNSNRPVQLLRRHWIITDANGKTENVWGLGVIGEQPAILPRTSFEYSSACPLSTQNGRMEGDFEMIHIDKVGSRSFNVAIAPFSLSLLGDGDGDTI* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0633 272 Pfam ApaG domain 159 242 IPR007474 -
Lan15g0633 272 SUPERFAMILY C-terminal UvrC-binding domain of UvrB 67 96 IPR036876 -
Lan15g0633 272 Gene3D ApaG domain 137 266 IPR036767 -
Lan15g0633 272 ProSiteProfiles ApaG domain profile. 141 268 IPR007474 -
Lan15g0633 272 ProSiteProfiles UVR domain profile. 98 133 IPR001943 GO:0005515
Lan15g0633 272 Pfam UvrB/uvrC motif 71 93 IPR001943 GO:0005515
Lan15g0633 272 Pfam UvrB/uvrC motif 103 129 IPR001943 GO:0005515
Lan15g0633 272 PANTHER OS05G0170800 PROTEIN 43 267 - -
Lan15g0633 272 ProSiteProfiles UVR domain profile. 63 98 IPR001943 GO:0005515
Lan15g0633 272 Gene3D UVR domain 65 99 - -
Lan15g0633 272 SUPERFAMILY ApaG-like 143 262 IPR036767 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0633 Lan-Chr15 14416420 14421607 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0633 - K06195 gmx:100799029 382.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1958 1 34839681 34842561 Lan15g0633 15 14416420 14421607 PCT
Lan15g0633 15 14416420 14421607 Lan1g1958 1 34839681 34842561 PCT