Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0621 ATGGCTTCAGCTTCTGAAAAAATGGTACCTCCTTCTTGTGCTTGTTGTTCAGCCGGTAATGACTCTGCCATCATTCCCCACATTGCGGCTGCCGCCGCTCCCTCTGCTGACTGGACTGCCAATGTCCCCGATGATGGCCGCCTAAATAAGATGACCATCGTTCATCCTGTCGACTCCCTACCGCAACCTTCCATCAATGCCAAAGGAATCATTACACTGCCAAGGCCTCAACCAAGCCACCCTTTGGACCCTTTATCTCCTGCTGAAATCTCTCTGGCAGTAGCTACTGTGAGGGCTGCTGGAAAAACTCCTGAGCTTAAAGACGGTTTGCGATTCATGGAAATAGCTTTGCTCGAACCGGATAAACATGTCGTTGCACTAGCAGATGCTTATTTTTTTCCACCTTTCCAGCCATCATTGCTTCCTAAAGGAGGGTTTGTGATCCCAACTAAACTCCCTCCAAGATGTGCTAGACTTCTTGTTTACAATAGGAAGACAAATGAGACTAGTCTTTGGATCGTCGAGTTATCGCAAGTTCATGCTGTAACTCGAGGTGGAAATCATTTAGGAAAAGTAATTTCATCACAAGTTGTACCTGATGTTCAGCCTCCAATGGATGCTGTGGAGTATGCAGAATGTGAGGCTGCTGTTAAAAGTTATCCTCCATTTATAGAGGCTATGAAGAAAAGGGGTATTGAAAACATGGAGCTTGTGATGGTAGATCCCTGGTGTGCTGGTTACTTCAGTGAAGCTGATGATCCGAACCGAAGACTTGCTAAACCAATAATATTTTGCAAGTGTGAGAGTGATTGCCCTATGGAAAATGGCTATGCTCGCCCGGTCGAGGGAATCTTTGTTCTTGTTGATATGCAAAAGATGGAGGTGATACAGTTCGAAGACCGCAAACTTGTTCCTCTGCCTCCTGTAGATCCCTTAAGGAACTATACACATGCTGCAACTAGAGGTGGCACTGATAGAAGTGACTTAAAACCATTGAAAATTGTTCAACCTGAAGGTCCAAGCTTTTCCGTCAATGGATATTATGTTGAATGGCAAAAGTGGAACTTTCGGATTGGATTCACACCCAAAGAAGGTTTAGTTATATATTCTGTTGCATATGTTGATGGTAGTCAAGGTCTAAGGCCTGTAGCTCATAGGTTGAGTTTTGTGGAGATGGTTGTACCCTACGGAGATCCAAACGATCCACATTACAGGAAAAATGCTTTTGATGCTGGGGAAGATGGCCTAGGAAGAAATGCACATTCCTTGAAGAAGGGATGTGATTGTTCTGGCATAGTCAAATATTTTGATGCTCACTTCACAAATTTCACTGGTGGTGTGGAGACAATTGAAAATTGTGTATGTTTGCATGAAGAAGATCATGGAATTCTTTGGAAGCATCAAGATTGGAGAACTGGCTTATCAGAAGTCCGAAGGTCTAGAAGGCTTTCAGTTTCATTTATATGTACTGTGGCTAACTATGAGTATGGATTTTTTTGGCACTTTTATCAGGATGGAAAGATGGAAGCTGAAGTTAAGCTAACTGGAATTCTGAGCATGGGAGCCTTAATGCCCGGAGAGTATCGAAAATATGGAACCGTGATTGCCCCAGGTCTATATGCTCCAGTTCATCAACACTTTTTTGTTGCTCGTATGAACATGGCTGTTGATTCTAGACCTGGTGAAGCTTTGAATCAGGTTGTGGAAGTCAATGTGAAAGCTGAGGAACCTGGTGATCATAATGTTCACAATAATGCATTCTATGCCGAAGAAACTTTGCTCAGATCTGAAATGGAAGCAATGCGTGATTGCGATCCCATGACTGCTCGATCTTGGATTGTAAGGAATACAAGATCAACCAATAGAACTGGACACTTGACAGGCTACAAGCTAGTACCTGGCTCGAACTGCTTACCATTCGCGCATTCGGATGCCAAGTTTTTAAGAAGAGGTGCTTTCTTGAAGCATAATCTTTGGGTTACAGCTTACTCACCCGATGAGCTGTTTCCTGGAGGAGAATTTCCTAATCAAAATCCACGCATTGGCGACGGATTACCTACATGGGTTACGCAGAACCGATCTTTAGAAGAGTCTGATATAGTTCTTTGGTATGTATTTGGAGTCACACATGTTCCTCGTTTAGAAGACTGGCCTGTTATGCCAGTAGAGCACATTGGTTTTATGCTCATGCCTCATGGATTCTTCAATTGTTCCCCTGCAATAGATGTTCCACCTAGTAAATGTGAATTGGAGGCTAAAGAAAAAGATATAAAGGATAATGGGGTTTTGAAGCCAATTGAGAATTCCTTAGCATCAAAGCTCTAA 2325 0.431 MASASEKMVPPSCACCSAGNDSAIIPHIAAAAAPSADWTANVPDDGRLNKMTIVHPVDSLPQPSINAKGIITLPRPQPSHPLDPLSPAEISLAVATVRAAGKTPELKDGLRFMEIALLEPDKHVVALADAYFFPPFQPSLLPKGGFVIPTKLPPRCARLLVYNRKTNETSLWIVELSQVHAVTRGGNHLGKVISSQVVPDVQPPMDAVEYAECEAAVKSYPPFIEAMKKRGIENMELVMVDPWCAGYFSEADDPNRRLAKPIIFCKCESDCPMENGYARPVEGIFVLVDMQKMEVIQFEDRKLVPLPPVDPLRNYTHAATRGGTDRSDLKPLKIVQPEGPSFSVNGYYVEWQKWNFRIGFTPKEGLVIYSVAYVDGSQGLRPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGRNAHSLKKGCDCSGIVKYFDAHFTNFTGGVETIENCVCLHEEDHGILWKHQDWRTGLSEVRRSRRLSVSFICTVANYEYGFFWHFYQDGKMEAEVKLTGILSMGALMPGEYRKYGTVIAPGLYAPVHQHFFVARMNMAVDSRPGEALNQVVEVNVKAEEPGDHNVHNNAFYAEETLLRSEMEAMRDCDPMTARSWIVRNTRSTNRTGHLTGYKLVPGSNCLPFAHSDAKFLRRGAFLKHNLWVTAYSPDELFPGGEFPNQNPRIGDGLPTWVTQNRSLEESDIVLWYVFGVTHVPRLEDWPVMPVEHIGFMLMPHGFFNCSPAIDVPPSKCELEAKEKDIKDNGVLKPIENSLASKL* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0621 774 Gene3D Copper amine oxidase, catalytic domain 318 745 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lan15g0621 774 Pfam Copper amine oxidase, N3 domain 203 306 IPR015802 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lan15g0621 774 Pfam Copper amine oxidase, N2 domain 80 125 IPR015800 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lan15g0621 774 SUPERFAMILY Amine oxidase N-terminal region 202 319 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lan15g0621 774 PANTHER AMINE OXIDASE 51 762 - -
Lan15g0621 774 SUPERFAMILY Amine oxidase catalytic domain 326 745 IPR036460 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lan15g0621 774 Gene3D - 66 205 - -
Lan15g0621 774 PANTHER COPPER AMINE OXIDASE 51 762 IPR000269 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lan15g0621 774 SUPERFAMILY Amine oxidase N-terminal region 78 204 IPR016182 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lan15g0621 774 Pfam Copper amine oxidase, enzyme domain 333 741 IPR015798 GO:0005507|GO:0008131|GO:0009308|GO:0048038
Lan15g0621 774 Gene3D - 208 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0621 Lan-Chr15 14027256 14034216 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0621 K00276 - gmx:100798722 1281.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan1g1953 1 34785327 34791973 Lan15g0621 15 14027256 14034216 PCT
Lan15g0621 15 14027256 14034216 Lan1g1953 1 34785327 34791973 PCT