Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0582 ATGAGAACGGATCGGTGGGCTAAGAGTATGGGAAGGATTTCAAGGATTGGGAGTGTTGCAATTGCTTCTTCCATTAAGGAGAATCAGCAACAACCTTGCATTACCTGCACTACTTTTAACATTCTTGCTCCTATTTACAAGCGCATCGATCATGAGGACCCAAGTTGCCGTGAAAGTGATTATAGAGCGTTCTGGCTGGCAAGGAATCATACCATATTGGATTGGCTTTTGCAGGAGAGCTCTTCAATTATCTGTCTTCAGGAATTTTGGGTTGGAAATGAAGAGCTTGTTAATTTGTATGAAAAGAGACTTGGGGATGCTGGTTATGTCAGTTTCAAGCTGGGAAGGACTAACAACCGTGGCGATGGTCTTCTGATAGCAGTGCAAAGGGACTACTTTAATATCCTTAATTATAAGGAGTTGCACTTCAACGATTGTGGTGATCGTGTAGCTCAGCTGTTACATGTTGAACTAGCTTTTCCATGTTCACAGTGGCAGAACAGTGATATCAGGCAGGAAATTCTGATTGTTAACACTCACCTACTATTTCCTCATGATTCAAGCTTAAGCCTTGTTCGACTGCATCAGGTCTACAAGATACTTCAGTATGTAGAATCTTATCAAGAAGATTTCCAACTTAAGCCCATGCCAATCATGCTATGCGGTGACTGGAACGGAAGCAAACGTGGATATGTTTACAAGTTCTTGAGGTCCCAAGGGTTTGAATCATCCTATGATACTGCACATCACTACACTGATGCAGATGCTCATAAGTGGGTTAGCCACCGCAATCATCGGGGAAATATTTGTGCTGTTGATTTCATTTGGCTTCTAAATCCTGACAAATATCGAAAACTACTAAAAGCTAGTTGGAGTGAAGCAGTATTTAGCATGTTCAAGTCTCTACTGAGGAGAGCTTCACTAACAGAGAGTGATGCATTTGCCTTTCTAAAGGCTGATAATGAAGATTGTATAACCTATTCTGGTTTCTGTGAAGCACTTCGACAGCTTAATTTATTTGGTCATTGCTATGGGCTAAGTATTGAAGAGACAAAGGATTTGTGGGTCCAATCAGATGTAGATGGGAATGGTGTTCTTGATTATAAAGAATTTCAGCAAATCTGGAATTCAACAAATTTAGAACAAAGAGATGACAAGAATGAGGAGCCGGATATTGGTTCAAATGATGCTCAGGAGCAAACAATTGGTTTCAGTGTAAAAAATGCAGTTCTGTTCCCTCCAGAGGTGGAGAAAGGTAGATGGCCAGAAGACTACTCTCTTTCTGATCATGCAAGGCTCACTGTGGTGTTCTCGCCGATAAGAGTTTCACGCTCTCAAATGATTTGCTGA 1350 0.4119 MRTDRWAKSMGRISRIGSVAIASSIKENQQQPCITCTTFNILAPIYKRIDHEDPSCRESDYRAFWLARNHTILDWLLQESSSIICLQEFWVGNEELVNLYEKRLGDAGYVSFKLGRTNNRGDGLLIAVQRDYFNILNYKELHFNDCGDRVAQLLHVELAFPCSQWQNSDIRQEILIVNTHLLFPHDSSLSLVRLHQVYKILQYVESYQEDFQLKPMPIMLCGDWNGSKRGYVYKFLRSQGFESSYDTAHHYTDADAHKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWSEAVFSMFKSLLRRASLTESDAFAFLKADNEDCITYSGFCEALRQLNLFGHCYGLSIEETKDLWVQSDVDGNGVLDYKEFQQIWNSTNLEQRDDKNEEPDIGSNDAQEQTIGFSVKNAVLFPPEVEKGRWPEDYSLSDHARLTVVFSPIRVSRSQMIC* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0582 449 Gene3D Endonuclease/exonuclease/phosphatase 17 445 IPR036691 -
Lan15g0582 449 SUPERFAMILY EF-hand 235 379 IPR011992 -
Lan15g0582 449 ProSiteProfiles EF-hand calcium-binding domain profile. 346 381 IPR002048 GO:0005509
Lan15g0582 449 MobiDBLite consensus disorder prediction 379 398 - -
Lan15g0582 449 PANTHER ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE FAMILY PROTEIN 1 445 - -
Lan15g0582 449 Pfam Endonuclease/Exonuclease/phosphatase family 38 245 IPR005135 GO:0003824
Lan15g0582 449 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 1 445 - -
Lan15g0582 449 ProSitePatterns EF-hand calcium-binding domain. 359 371 IPR018247 -
Lan15g0582 449 SUPERFAMILY DNase I-like 26 249 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0582 Lan-Chr15 13199321 13204166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan15g0582 11 340 EF-hand Containing Proteins AT5G54130 77.644 0.0 543
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0582 - - gmx:100797792 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0582 15 13199321 13204166 Lan15g0582 15 13199321 13204166 ECH
Lan9g1167 9 19097726 19100913 Lan15g0582 15 13199321 13204166 PCT
Lan15g0582 15 13199321 13204166 Lan9g1167 9 19097726 19100913 PCT