Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan15g0478 ATGGCATCAGGGGCAACGGGATGGTACAGGGGAAGAGTGAAAGCGGTTCCATCTGGGGACTATTTGGTAATTGTGGCTATTGCTAGCTCTAAGCCTGGTCCACTGCCTGAAAAGACCATAACTTTATCATCTCTTGTTGCTCCTAGACTGGCACGACGAGGTGGTGTGGACGAGCCATTTGCATGGGAAAGTAGAGAGTTTCTAAGGAAGCTCTGCATAGGGAAGGAAGTGACTTTCAAGGTTGATTACAATGTACCATCCATTAATCGAGATTTTGGAACCGTTTTTGTTGGCGACAAGAATGTTGCATTGCTGGTTGTTTCTCAAGGGTGGGCAAAGGTCAGGGAACAAGGACAGCAAAAAGGAGAAGCGAGTCCTTACCTGGCAGAGTTGTTACGCTTGGAAGAACAAGCTAAACAAGAAGGCCTTGGTCGCTGGAACAAGGATCCTGGTGCTAGTGAGGCATCCATCAGAAATCTACCACCTTCTGCCATTGGTGATTCCAGTAACTTCGATGCTATGGGTTTATTAGCTGCAAACAAGGGTGCACCCATGGAAGCAATTGTTGAGCAAGTCCGTGATGGCAGTACAATCCGGGTTTATTTACTCCCAGAGTTTCAGTTTGTGCAAGTTTTTGTTGCTGGAATTCAGTCACCATCAATGGGAAGGAGAGCTGTAGTAGAAAGTGTTGTTGAATCAGAGGTGACAGCTGATGACACTAATGGAGATGCTCCTGGGAAACCCCAGGGCCCACTTACATCTGCCCAAAAACTTGCAGCTTCAGCATCTGCTGAAACTACTGTTGCTGATCCTTTTGCACTTGATGCTAAATTTTTTACTGAGTTGCGTGTATTGAATCGAGATGTTCGTATCGTTCTTGAAGGTGTTGATAAGTTCAACAATTTGATTGGATCAGTGTATTATCCTGATGGTGAATCGGCAAAGGACCTGGCATTGGAGCTAGTGGAAAATGGTTTAGCTAGATATATTGAATGGAGCGCAAATATGATGGAAGAAGAGGCAAAGCGGAGGCTAAAGACTGCAGAGCTCCAGGCAAAGAAAACAAGGTTGAGGGTTTGGACTAACTATGTACCACCACCTTCAAACTCTAAGGCTATTCATGACCAAAATTTTACTGGCAAGGTGGTTGAGGTTGTCAGTGGAGATTGCATCATTGTTGCTGATGATTCCATCCCATTTGGCAGTCCGCTAGCAGAGAGGCGAGTTAACCTTTCAAGCATTAGGTCTCCAAAAATAGGCAATCCTCGGCGAGATGAGAAACCAGCTCCTTATGCCCGTGAAGCAAAGGAATTCTTGAGAACTCGCCTCATTGGTCGTCAAGTGAATGTTCAACTGGAGTATTCTAGAAAGATTGCACCCACAGATGGATCTGCAGTTCCATCTGGAGCTGCTGATTCTAGAGTGATGGATTTTGGATCCGTCTTCGTGTTGTCCCCTGCGAAGGGTGATGGTGATGGTGATGATGCCCCTTCATCTGCTCCACCTGCTGGAGCTCAGCACACTGGGGTGAATGTAGGTGAGCTTGTAGTTTCCCGTGGCTTGGGAACTGTCATCAGACATCGTGACTTTGAAGAGAGATCAAACTACTATGATGCTCTTCTTGCTGCCGAATCACGTGCTATTTCTGGAAGGAAACTGATCCATTCTGGCAAGGATTCTCCAGCAAGTCATATAACTGACCTGACCACGGCATCAGCCAAGAAAGCGAAAGACTTCTTGCCTTCCCTGCACCGAATTAGAAAAACTTCTGCTGTTGTGGAATATGTCCTCAGCGGCCATCGTTTCAAATTGTTTATTCCAAAAGAAACTTGCAGCTTTGCTTTCTCACTATCTGGTGTAAGATGTCCTGGTCGTGGTGAGCCATACTCTGAAGAAGCAATTGCATTGATGAGGCGAAAGATAATGCAGAGAGATGTGGAGATTGAGGTTGAAACGGTTGATCGAAATGGAACATTCTTGGGATCGTTATGGGAGTCCAAGACCAATGTGGCAATTACACTACTGGAAGCTGGTCTGGCTAAACTCCAAATCTCCTTCAGCAATGACAGAATTCCGGATCTTCACCTTCTACAGAAGGCCGAACAATCTGCGAAGAAGCAAAAACTGAAAATCTGGGAAAACTTTGTCGAAGGGGAGGAGGTATCCAACGGGGCAGCTGTAGAGAATAAACAGAAGGAAGTGCTCAAGGTAATTATCTCAGAAGTCTTGGGTGGTGGTAAATTCTATGTTCAGACCATTGGAGATCAAAAGATAGTCTCCATTCAGAACCAGCTTGCTTCTTTGAACCTTAAGGAAGCTCCTGTGATTGGTGCTTTTAATCCTAAGAAGGGTGACATAGTCCTCTGTCATTTCCTTGCTGATAACTCTTGGTACCGGGCAATGATTGTCAACACACCTAGAGGACCAGTTGAGTCACCAAAAGACAAATTTGAAGTATTCTACATTGATTATGGTAATCAAGAAGAAGTAGCTTACAGTCAGTTACGGCCTCTTGATCCAACTGTGTCTGCTGCACCTGGTCTTGCTCAATTATGTAGCCTTGCTTACATAAAGCTTCCAAACTTGGAAGAGGATTATGGCCAAGAGGCAGCAGAATATTTGAGTGAGATCACTTTAAACAGTGGAAAAGAGTTCGGGGCCAAGGTTGAGGAGAGAGATACTACTGGAGGAAAAGTGAAAGGGCAGGGAACTGGGACAGTTCTTGCTGTGACTCTTGTTGCGGTCGATTCTGATATTAGTGTTAATGCTCTCATTTTACAGGAAGGACTTGCTAGGACTGAGAAACGGAATAGGTGGGACAAAAGAGAAAGACAGCTGGCCCTTGATAATTTGGAGAACTTCCAGGAAGAAGCGAAGACCAGCAGGCGTGGAATATGGCAGTATGGGGATATTCAGTCTGATGATGAGGACACTGCTCCTCCCGCAAGAAAGGCTGGTGGCCGTAAATGA 2970 0.4549 MASGATGWYRGRVKAVPSGDYLVIVAIASSKPGPLPEKTITLSSLVAPRLARRGGVDEPFAWESREFLRKLCIGKEVTFKVDYNVPSINRDFGTVFVGDKNVALLVVSQGWAKVREQGQQKGEASPYLAELLRLEEQAKQEGLGRWNKDPGASEASIRNLPPSAIGDSSNFDAMGLLAANKGAPMEAIVEQVRDGSTIRVYLLPEFQFVQVFVAGIQSPSMGRRAVVESVVESEVTADDTNGDAPGKPQGPLTSAQKLAASASAETTVADPFALDAKFFTELRVLNRDVRIVLEGVDKFNNLIGSVYYPDGESAKDLALELVENGLARYIEWSANMMEEEAKRRLKTAELQAKKTRLRVWTNYVPPPSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIPFGSPLAERRVNLSSIRSPKIGNPRRDEKPAPYAREAKEFLRTRLIGRQVNVQLEYSRKIAPTDGSAVPSGAADSRVMDFGSVFVLSPAKGDGDGDDAPSSAPPAGAQHTGVNVGELVVSRGLGTVIRHRDFEERSNYYDALLAAESRAISGRKLIHSGKDSPASHITDLTTASAKKAKDFLPSLHRIRKTSAVVEYVLSGHRFKLFIPKETCSFAFSLSGVRCPGRGEPYSEEAIALMRRKIMQRDVEIEVETVDRNGTFLGSLWESKTNVAITLLEAGLAKLQISFSNDRIPDLHLLQKAEQSAKKQKLKIWENFVEGEEVSNGAAVENKQKEVLKVIISEVLGGGKFYVQTIGDQKIVSIQNQLASLNLKEAPVIGAFNPKKGDIVLCHFLADNSWYRAMIVNTPRGPVESPKDKFEVFYIDYGNQEEVAYSQLRPLDPTVSAAPGLAQLCSLAYIKLPNLEEDYGQEAAEYLSEITLNSGKEFGAKVEERDTTGGKVKGQGTGTVLAVTLVAVDSDISVNALILQEGLARTEKRNRWDKRERQLALDNLENFQEEAKTSRRGIWQYGDIQSDDEDTAPPARKAGGRK* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan15g0478 989 MobiDBLite consensus disorder prediction 143 163 - -
Lan15g0478 989 CDD TUDOR 784 837 IPR002999 -
Lan15g0478 989 Pfam Tudor domain 732 855 IPR002999 -
Lan15g0478 989 SUPERFAMILY Staphylococcal nuclease 6 149 IPR035437 -
Lan15g0478 989 PIRSF RISC-Tudor-SN 1 980 IPR016685 GO:0016442|GO:0031047
Lan15g0478 989 ProSiteProfiles Thermonuclease domain profile. 587 714 IPR016071 -
Lan15g0478 989 Coils Coil 338 358 - -
Lan15g0478 989 Gene3D - 568 712 IPR035437 -
Lan15g0478 989 ProSiteProfiles Tudor domain profile. 780 845 IPR002999 -
Lan15g0478 989 Pfam Staphylococcal nuclease homologue 861 967 IPR016071 -
Lan15g0478 989 Pfam Staphylococcal nuclease homologue 40 147 IPR016071 -
Lan15g0478 989 Pfam Staphylococcal nuclease homologue 615 714 IPR016071 -
Lan15g0478 989 Pfam Staphylococcal nuclease homologue 267 361 IPR016071 -
Lan15g0478 989 ProSiteProfiles Thermonuclease domain profile. 183 362 IPR016071 -
Lan15g0478 989 Gene3D - 175 372 IPR035437 -
Lan15g0478 989 Gene3D - 737 969 IPR035437 -
Lan15g0478 989 PANTHER RIBONUCLEASE TUDOR 1 2 985 - -
Lan15g0478 989 SUPERFAMILY Staphylococcal nuclease 583 714 IPR035437 -
Lan15g0478 989 SUPERFAMILY Tudor/PWWP/MBT 773 857 - -
Lan15g0478 989 SUPERFAMILY Staphylococcal nuclease 791 974 IPR035437 -
Lan15g0478 989 Gene3D - 753 849 - -
Lan15g0478 989 ProSiteProfiles Thermonuclease domain profile. 376 557 IPR016071 -
Lan15g0478 989 SUPERFAMILY Staphylococcal nuclease 373 560 IPR035437 -
Lan15g0478 989 MobiDBLite consensus disorder prediction 236 258 - -
Lan15g0478 989 SMART TUDOR_7 779 843 IPR002999 -
Lan15g0478 989 Gene3D - 374 565 IPR035437 -
Lan15g0478 989 Gene3D - 7 153 IPR035437 -
Lan15g0478 989 ProSiteProfiles Thermonuclease domain profile. 7 148 IPR016071 -
Lan15g0478 989 SMART SNASE_2 7 148 IPR016071 -
Lan15g0478 989 SMART SNASE_2 183 362 IPR016071 -
Lan15g0478 989 SMART SNASE_2 587 714 IPR016071 -
Lan15g0478 989 SMART SNASE_2 376 557 IPR016071 -
Lan15g0478 989 MobiDBLite consensus disorder prediction 959 989 - -
Lan15g0478 989 PANTHER EBNA2 BINDING PROTEIN P100 2 985 - -
Lan15g0478 989 SUPERFAMILY Staphylococcal nuclease 180 367 IPR035437 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan15g0478 Lan-Chr15 11133012 11143919 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan15g0478 K15979 - gmx:100794481 1672.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0478 15 11133012 11143919 Lan14g0394 14 8550755 8557562 LSH