Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan14g0394 ATGACATCAGGGGCAACGGGATGGTACAGGGGAAGAGTGAAAGCTGTTCCATCCGGGGATTGTTTGGTAATTGTGGCTATTGCTAGCTCAAAGCCTGGTCCACTGCCTGAAAAGAGCATCACTTTATCATCTCTTATTGCACCTAGACTGGCACGACGAGGTGGTGTGGACGAGCCATATGCATGGGAAAGTAGAGAGTTTCTAAGGAAGCTCTGTATAGGGAAGGAAGTGACTTTCAAGGTTGATTACAATGTGGCATCCATAAGTCGAGATTTTGGAACTGTTTTTGTCGGTGACAAGAATGTTGCATCGCTGGTGGTCTCTCAAGGATGGGCAAAGGTCAGGGAACAAGGTCAGCAGAAAGGAGAAGCGAGTCCTTACCTGGCAGAGTTGTTACGTTTGGAAGAACAATCTAAACAAGACGGTCTTGGTCGCTGGAACAAGGATCCTGGTGCTGGTGAGGCATCCATCAGAAACCTACCACCTTCTGCCATTGGTGATTCTAGTAACTTCGATGCTATGGGTTTATTAGCTTCAAACAAGGGTGCGCCAATGGAAGCAATTGTTGAGCAGGTTCGTGATGGCAGTACCATCCGGGTCTATTTACTTCCAGAGTTTCAGTTTGTCCAAGTTTTTGTTGCTGGAATTCAGGCCCCATCAATGGGAAGGAGAGTTGTGTCTGAAAGTGTTGTTGAATCAGAAGTGACAACTGATAAAACTAATGGAGATGCTCATCGGGAACCTCAAGCTCCGCTTACATCTGCCCAAAAACTTGCAGCTTCAGCAACTTCTGAAACTACTTCTCCTGATCCTTTTGCACCCGACGCTAAATTTTTTACTGAGATGCGCGTCTTGAATCGAGATGTTCGTATCGTTCTTGAAGGTGTTGATAAGTTCAGCAATTTGATTGGATCTGTGTATTATCCTGACGGTGAATCGGCAAAAGACCTGGCATTGGAGCTACTGGAAAATGGTTTAGCTAGATATGTTGAATGGAGTGCAAATATGATGGAAGAAGAGGCAAAGCGAAGGCTGAAGACTACAGAGCTCCAGGCAAAGAAAACAAGGCTAAGGGTTTGGACTAACTATGTACCACCACTTTCAAATTCTAAGGCAATTCATGACCAAAACTTTACTGGCAAGGTGGTTGAGGTTGTCAGTGGAGACTGCATCATTGTTGCTGATGATTCCATTCAATTTGGTAGCCCTCTAGCTGAAAGGCGAGTTAACCTTTCAAGTATTAGGTGTCCAAAAATAGGCAATCCTCGACGAGATGAGAAACCAGCTCCTTATGCCCGTGAAGCAAAGGAGTTCTTGAGAACTCGCCTCATTGGTCATCAAGTGAATGTTCAAATGGAGTATTCTAGAAAGGTTGTTCCCACAGATGGATCTGCTGTTCCATCTGGAGCTAATGCTGATTCCAAAGTAATGGATTTTGGATCAGTCTTCTTGCCGTCCACTGTGAAGGTTGACGGTGATGTTGCCCCTTCATCTGTTCCACCTGCTGGCACTCAGCAGACTGGGGTGAATGTAGGCGAGCTTGTAGTTTCCCGTGGCTTCGGAACTGTCATCAGACATCGTGACTTCGAAGAGAGATCAAACTATTATGATGCTCTTCTTGCTGCCGAATCGCGTGCCATTTCTGGAAGGAAACTGATTCATTCTGGAAAGGATTCTCCAGCAAGTCATATAACTGACTTGACCACGGCATCAGCCAAGAAAGCCAAAGACTTCTTGCCGTTCCTACAACGAAGTAGAAAAACTTCCGCTGTCGTGGAATATGTCCTCAGCGGCCATCGTTTCAAATTGTTAATTCCAAAAGAAACTTGCAGCATTGCTTTCTCATTCTCTGGTGTCAGATGTCCTGGTCGTGGTGAGCCATATTCTGAACAAGCAATTGCATTGATGAGGCGAAAGATAATGCAGAGAGATGTTGAGATTGAGGTTGAAACGGTAGATAGAACTGGAACATTCTTGGGGTCGTTATGGGAGTCTAGGACCAATGTTGCAATTACACTACTGGAAGCTGGTCTGGCTAAACTTCAAACCTCCTTTGGCAATGATAGAATTCCGGATATTCACCTTCTGCAGCAAGCTGAAGAATCTGCAAAGAAGCAAAAACTGAAAATCTGGGAAAACTTCGTTGAAGGGGTGGGCGAATCCAATGGTGTAGCTGTTCAGAATAAACAAGAAGAAGTGCTCCAGGTAATTGTCACAGAAGTCTTGGGTGGTGGTAAATTCTATGTTCAGACTGTTGGGGATCAAAAGATAGCATCCATTCAGAACCAGCTTGCTTCTTTGAACCTTAAAGAAGCTCCCGTGCTTGGTGCTTTTAGTCCTAAGAAGGGTGACATAGTCCTTTGTCATTTTCTCGCTGATAACTCTTGGTACCGTGCAATGATTGTCAACACACCTCGAGGACCAGTTGAATCACCAAAAGACAAATTTGAAGTATTCTACATGGATTATGGTAATCAAGAAGAAGTAGCTTACAGCCAGTTAAGACCTCTTGATCCATCTGTGTCTGCAGCACCTGGTCTTGCTCAATTGTGTAGCCTTGCGTACATAAAGCTTCCAAACTTGGAAGAGGATTTTGGCCACGAAGCAGCTGAATATTTGAGTGATCTCACTTTGAACAGTGGAAAAGAGTTCAGAGCCACGGTTGAGGAGAGAGATACTTCAGGAGGAAAAGTGAAAGGGCAGGGAACGGGGACATTTCTTGCTGTGACTCTTGTTGCTGTCGATTCTGAGATTAGCATTAATGCTCTGTTGCTACAGGATGGGGTTGCTAGGACTGAGAAAAGAAATAGGTGGGACAAAAGACAAAGGCAGCTGGCCCTTGATAATTTGGAGAAGTTCCAAGAAGAAGCACGGACCAGCAGACGAGGGATATGGCAGTATGGAGATATTCAGTCTGATGATGAGGACACTGTTCCTCCTGCAAGGAAGGCAGGTGGCCGATAG 2964 0.4511 MTSGATGWYRGRVKAVPSGDCLVIVAIASSKPGPLPEKSITLSSLIAPRLARRGGVDEPYAWESREFLRKLCIGKEVTFKVDYNVASISRDFGTVFVGDKNVASLVVSQGWAKVREQGQQKGEASPYLAELLRLEEQSKQDGLGRWNKDPGAGEASIRNLPPSAIGDSSNFDAMGLLASNKGAPMEAIVEQVRDGSTIRVYLLPEFQFVQVFVAGIQAPSMGRRVVSESVVESEVTTDKTNGDAHREPQAPLTSAQKLAASATSETTSPDPFAPDAKFFTEMRVLNRDVRIVLEGVDKFSNLIGSVYYPDGESAKDLALELLENGLARYVEWSANMMEEEAKRRLKTTELQAKKTRLRVWTNYVPPLSNSKAIHDQNFTGKVVEVVSGDCIIVADDSIQFGSPLAERRVNLSSIRCPKIGNPRRDEKPAPYAREAKEFLRTRLIGHQVNVQMEYSRKVVPTDGSAVPSGANADSKVMDFGSVFLPSTVKVDGDVAPSSVPPAGTQQTGVNVGELVVSRGFGTVIRHRDFEERSNYYDALLAAESRAISGRKLIHSGKDSPASHITDLTTASAKKAKDFLPFLQRSRKTSAVVEYVLSGHRFKLLIPKETCSIAFSFSGVRCPGRGEPYSEQAIALMRRKIMQRDVEIEVETVDRTGTFLGSLWESRTNVAITLLEAGLAKLQTSFGNDRIPDIHLLQQAEESAKKQKLKIWENFVEGVGESNGVAVQNKQEEVLQVIVTEVLGGGKFYVQTVGDQKIASIQNQLASLNLKEAPVLGAFSPKKGDIVLCHFLADNSWYRAMIVNTPRGPVESPKDKFEVFYMDYGNQEEVAYSQLRPLDPSVSAAPGLAQLCSLAYIKLPNLEEDFGHEAAEYLSDLTLNSGKEFRATVEERDTSGGKVKGQGTGTFLAVTLVAVDSEISINALLLQDGVARTEKRNRWDKRQRQLALDNLEKFQEEARTSRRGIWQYGDIQSDDEDTVPPARKAGGR* 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan14g0394 987 ProSiteProfiles Thermonuclease domain profile. 183 362 IPR016071 -
Lan14g0394 987 SUPERFAMILY Staphylococcal nuclease 373 559 IPR035437 -
Lan14g0394 987 MobiDBLite consensus disorder prediction 964 987 - -
Lan14g0394 987 Gene3D - 175 372 IPR035437 -
Lan14g0394 987 SUPERFAMILY Staphylococcal nuclease 580 713 IPR035437 -
Lan14g0394 987 Pfam Staphylococcal nuclease homologue 860 966 IPR016071 -
Lan14g0394 987 Pfam Staphylococcal nuclease homologue 615 713 IPR016071 -
Lan14g0394 987 Pfam Staphylococcal nuclease homologue 40 147 IPR016071 -
Lan14g0394 987 Pfam Staphylococcal nuclease homologue 268 361 IPR016071 -
Lan14g0394 987 SUPERFAMILY Staphylococcal nuclease 6 149 IPR035437 -
Lan14g0394 987 PIRSF RISC-Tudor-SN 1 979 IPR016685 GO:0016442|GO:0031047
Lan14g0394 987 Coils Coil 338 358 - -
Lan14g0394 987 Pfam Tudor domain 731 854 IPR002999 -
Lan14g0394 987 ProSiteProfiles Thermonuclease domain profile. 586 713 IPR016071 -
Lan14g0394 987 Gene3D - 374 564 IPR035437 -
Lan14g0394 987 Gene3D - 7 152 IPR035437 -
Lan14g0394 987 SUPERFAMILY Tudor/PWWP/MBT 772 856 - -
Lan14g0394 987 Gene3D - 752 848 - -
Lan14g0394 987 ProSiteProfiles Thermonuclease domain profile. 376 556 IPR016071 -
Lan14g0394 987 ProSiteProfiles Tudor domain profile. 779 844 IPR002999 -
Lan14g0394 987 SMART SNASE_2 376 556 IPR016071 -
Lan14g0394 987 SMART SNASE_2 7 148 IPR016071 -
Lan14g0394 987 SMART SNASE_2 183 362 IPR016071 -
Lan14g0394 987 SMART SNASE_2 586 713 IPR016071 -
Lan14g0394 987 ProSiteProfiles Thermonuclease domain profile. 7 148 IPR016071 -
Lan14g0394 987 PANTHER RIBONUCLEASE TUDOR 1 5 983 - -
Lan14g0394 987 SUPERFAMILY Staphylococcal nuclease 790 973 IPR035437 -
Lan14g0394 987 SMART TUDOR_7 778 842 IPR002999 -
Lan14g0394 987 ProSiteProfiles Thermonuclease domain profile. 853 967 IPR016071 -
Lan14g0394 987 Gene3D - 567 711 IPR035437 -
Lan14g0394 987 SUPERFAMILY Staphylococcal nuclease 179 366 IPR035437 -
Lan14g0394 987 Gene3D - 736 968 IPR035437 -
Lan14g0394 987 CDD TUDOR 783 836 IPR002999 -
Lan14g0394 987 PANTHER EBNA2 BINDING PROTEIN P100 5 983 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan14g0394 Lan-Chr14 8550755 8557562 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan14g0394 K15979 - gmx:100794481 1677.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan15g0478 15 11133012 11143919 Lan14g0394 14 8550755 8557562 LSH